Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC188H7C350 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC188H7C350 AL031598.1-201ENST00000561511 1773 ntBASIC20.24■□□□□ 0.83
CCDC188H7C350 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC188H7C350 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC188H7C350 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC188H7C350 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC188H7C350 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC188H7C350 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC188H7C350 CNN2P6-201ENST00000439038 900 ntBASIC20.24■□□□□ 0.83
CCDC188H7C350 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC188H7C350 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC188H7C350 NTF6G-201ENST00000591094 616 ntBASIC20.24■□□□□ 0.83
CCDC188H7C350 AL589743.5-201ENST00000616611 1050 ntBASIC20.24■□□□□ 0.83
CCDC188H7C350 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC188H7C350 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
CCDC188H7C350 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC188H7C350 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC188H7C350 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC188H7C350 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC188H7C350 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC188H7C350 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC188H7C350 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC188H7C350 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC188H7C350 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC188H7C350 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC188H7C350 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC188H7C350 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CCDC188H7C350 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC188H7C350 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC188H7C350 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC188H7C350 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC188H7C350 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC188H7C350 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC188H7C350 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC188H7C350 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC188H7C350 LETM1P2-201ENST00000597330 2178 ntBASIC20.23■□□□□ 0.83
CCDC188H7C350 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC188H7C350 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCDC188H7C350 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC188H7C350 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC188H7C350 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC188H7C350 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC188H7C350 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC188H7C350 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC188H7C350 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC188H7C350 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC188H7C350 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC188H7C350 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC188H7C350 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC188H7C350 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC188H7C350 Z98044.1-201ENST00000632503 1764 ntBASIC20.22■□□□□ 0.83
CCDC188H7C350 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC188H7C350 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC188H7C350 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC188H7C350 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC188H7C350 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC188H7C350 AC069236.1-201ENST00000604339 616 ntBASIC20.22■□□□□ 0.83
CCDC188H7C350 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC188H7C350 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC188H7C350 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC188H7C350 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC188H7C350 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC188H7C350 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC188H7C350 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC188H7C350 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC188H7C350 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC188H7C350 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CCDC188H7C350 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC188H7C350 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC188H7C350 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC188H7C350 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC188H7C350 AC104581.1-202ENST00000635932 2618 ntBASIC20.22■□□□□ 0.83
CCDC188H7C350 AC026471.1-201ENST00000564629 3026 ntBASIC20.21■□□□□ 0.83
CCDC188H7C350 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC188H7C350 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC188H7C350 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC188H7C350 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC188H7C350 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC188H7C350 AL355472.2-201ENST00000422958 438 ntBASIC20.21■□□□□ 0.83
CCDC188H7C350 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC188H7C350 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC188H7C350 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC188H7C350 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC188H7C350 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC188H7C350 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC188H7C350 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC188H7C350 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC188H7C350 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC188H7C350 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCDC188H7C350 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC188H7C350 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC188H7C350 AC007613.1-201ENST00000572811 2597 ntBASIC20.21■□□□□ 0.83
CCDC188H7C350 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC188H7C350 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC188H7C350 AC135050.7-201ENST00000624508 2218 ntBASIC20.21■□□□□ 0.83
CCDC188H7C350 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CCDC188H7C350 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC188H7C350 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC188H7C350 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms