Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC25.89■■□□□ 1.74
RTL1A6NKG5 COX11P1-201ENST00000489116 835 ntBASIC25.89■■□□□ 1.74
RTL1A6NKG5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC25.89■■□□□ 1.74
RTL1A6NKG5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC25.89■■□□□ 1.74
RTL1A6NKG5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC25.89■■□□□ 1.74
RTL1A6NKG5 AL691432.2-201ENST00000607222 2038 ntBASIC25.89■■□□□ 1.73
RTL1A6NKG5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
RTL1A6NKG5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
RTL1A6NKG5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
RTL1A6NKG5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC25.88■■□□□ 1.73
RTL1A6NKG5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
RTL1A6NKG5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RTL1A6NKG5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTL1A6NKG5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTL1A6NKG5 COPE-203ENST00000351079 907 ntTSL 2 BASIC25.88■■□□□ 1.73
RTL1A6NKG5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC25.88■■□□□ 1.73
RTL1A6NKG5 PRSS44-201ENST00000515154 1146 ntBASIC25.88■■□□□ 1.73
RTL1A6NKG5 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC25.88■■□□□ 1.73
RTL1A6NKG5 AL512604.3-201ENST00000569583 964 ntBASIC25.88■■□□□ 1.73
RTL1A6NKG5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RTL1A6NKG5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
RTL1A6NKG5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTL1A6NKG5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC25.88■■□□□ 1.73
RTL1A6NKG5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC25.88■■□□□ 1.73
RTL1A6NKG5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC25.88■■□□□ 1.73
RTL1A6NKG5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
RTL1A6NKG5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTL1A6NKG5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC25.87■■□□□ 1.73
RTL1A6NKG5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTL1A6NKG5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTL1A6NKG5 ANKRD20A18P-201ENST00000359341 492 ntBASIC25.87■■□□□ 1.73
RTL1A6NKG5 CD70-202ENST00000423145 881 ntTSL 2 BASIC25.87■■□□□ 1.73
RTL1A6NKG5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC25.87■■□□□ 1.73
RTL1A6NKG5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC25.87■■□□□ 1.73
RTL1A6NKG5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC25.87■■□□□ 1.73
RTL1A6NKG5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC25.87■■□□□ 1.73
RTL1A6NKG5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTL1A6NKG5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC25.87■■□□□ 1.73
RTL1A6NKG5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTL1A6NKG5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTL1A6NKG5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTL1A6NKG5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
RTL1A6NKG5 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RTL1A6NKG5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
RTL1A6NKG5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
RTL1A6NKG5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
RTL1A6NKG5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
RTL1A6NKG5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC25.86■■□□□ 1.73
RTL1A6NKG5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RTL1A6NKG5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC25.86■■□□□ 1.73
RTL1A6NKG5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
RTL1A6NKG5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC25.86■■□□□ 1.73
RTL1A6NKG5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RTL1A6NKG5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC25.86■■□□□ 1.73
RTL1A6NKG5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RTL1A6NKG5 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC25.85■■□□□ 1.73
RTL1A6NKG5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC25.85■■□□□ 1.73
RTL1A6NKG5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC25.85■■□□□ 1.73
RTL1A6NKG5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC25.85■■□□□ 1.73
RTL1A6NKG5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RTL1A6NKG5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
RTL1A6NKG5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RTL1A6NKG5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RTL1A6NKG5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
RTL1A6NKG5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RTL1A6NKG5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC25.85■■□□□ 1.73
RTL1A6NKG5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC25.85■■□□□ 1.73
RTL1A6NKG5 GABARAPL3-202ENST00000624044 1851 ntBASIC25.85■■□□□ 1.73
RTL1A6NKG5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RTL1A6NKG5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
RTL1A6NKG5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RTL1A6NKG5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
RTL1A6NKG5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC25.84■■□□□ 1.73
RTL1A6NKG5 KRT8P11-201ENST00000409686 1436 ntBASIC25.84■■□□□ 1.73
RTL1A6NKG5 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
RTL1A6NKG5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC25.84■■□□□ 1.73
RTL1A6NKG5 AL031133.1-201ENST00000406807 723 ntBASIC25.84■■□□□ 1.73
RTL1A6NKG5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC25.84■■□□□ 1.73
RTL1A6NKG5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC25.84■■□□□ 1.73
RTL1A6NKG5 AP003041.3-201ENST00000527151 707 ntBASIC25.84■■□□□ 1.73
RTL1A6NKG5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC25.84■■□□□ 1.73
RTL1A6NKG5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC25.84■■□□□ 1.73
RTL1A6NKG5 AC008622.2-201ENST00000617006 1229 ntBASIC25.84■■□□□ 1.73
RTL1A6NKG5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC25.84■■□□□ 1.73
RTL1A6NKG5 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC25.84■■□□□ 1.73
RTL1A6NKG5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
RTL1A6NKG5 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RTL1A6NKG5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
RTL1A6NKG5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
RTL1A6NKG5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
RTL1A6NKG5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC25.84■■□□□ 1.73
RTL1A6NKG5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC25.84■■□□□ 1.73
RTL1A6NKG5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC25.84■■□□□ 1.73
RTL1A6NKG5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
RTL1A6NKG5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
RTL1A6NKG5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC25.83■■□□□ 1.73
RTL1A6NKG5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC25.83■■□□□ 1.73
RTL1A6NKG5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC25.83■■□□□ 1.73
RTL1A6NKG5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RTL1A6NKG5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms