Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 AC098590.1-201ENST00000468126 897 ntBASIC18.52■□□□□ 0.56
LRIT2A6NDA9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 C1QL1P1-201ENST00000568105 661 ntBASIC18.52■□□□□ 0.56
LRIT2A6NDA9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LRIT2A6NDA9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRIT2A6NDA9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRIT2A6NDA9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.52■□□□□ 0.55
LRIT2A6NDA9 AC116562.4-201ENST00000641316 2276 ntBASIC18.52■□□□□ 0.55
LRIT2A6NDA9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRIT2A6NDA9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRIT2A6NDA9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRIT2A6NDA9 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.51■□□□□ 0.55
LRIT2A6NDA9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 FAM197Y4-202ENST00000622692 608 ntBASIC18.51■□□□□ 0.55
LRIT2A6NDA9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 ZNF815P-204ENST00000434898 1737 ntBASIC18.51■□□□□ 0.55
LRIT2A6NDA9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRIT2A6NDA9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 AC007952.6-201ENST00000573168 2673 ntBASIC18.5■□□□□ 0.55
LRIT2A6NDA9 AC003957.1-201ENST00000625108 2673 ntBASIC18.5■□□□□ 0.55
LRIT2A6NDA9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 GCSHP5-201ENST00000443090 522 ntBASIC18.5■□□□□ 0.55
LRIT2A6NDA9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 AC142381.4-202ENST00000563973 229 ntBASIC18.5■□□□□ 0.55
LRIT2A6NDA9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRIT2A6NDA9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms