Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
SBNO1A3KN83 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SBNO1A3KN83 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SBNO1A3KN83 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC26.48■■□□□ 1.83
SBNO1A3KN83 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC26.48■■□□□ 1.83
SBNO1A3KN83 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SBNO1A3KN83 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SBNO1A3KN83 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SBNO1A3KN83 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
SBNO1A3KN83 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
SBNO1A3KN83 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
SBNO1A3KN83 PHB2-202ENST00000440277 996 ntTSL 5 BASIC26.47■■□□□ 1.83
SBNO1A3KN83 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC26.47■■□□□ 1.83
SBNO1A3KN83 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC26.47■■□□□ 1.83
SBNO1A3KN83 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SBNO1A3KN83 NT5C-210ENST00000582160 860 ntTSL 2 BASIC26.47■■□□□ 1.83
SBNO1A3KN83 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
SBNO1A3KN83 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SBNO1A3KN83 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SBNO1A3KN83 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC26.47■■□□□ 1.83
SBNO1A3KN83 KRT8P41-201ENST00000533985 1514 ntBASIC26.47■■□□□ 1.83
SBNO1A3KN83 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SBNO1A3KN83 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC26.47■■□□□ 1.83
SBNO1A3KN83 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SBNO1A3KN83 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC26.47■■□□□ 1.83
SBNO1A3KN83 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC26.46■■□□□ 1.83
SBNO1A3KN83 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
SBNO1A3KN83 CNP-204ENST00000472031 1019 ntTSL 2 BASIC26.46■■□□□ 1.83
SBNO1A3KN83 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SBNO1A3KN83 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC26.46■■□□□ 1.83
SBNO1A3KN83 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SBNO1A3KN83 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SBNO1A3KN83 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC26.46■■□□□ 1.83
SBNO1A3KN83 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
SBNO1A3KN83 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC26.46■■□□□ 1.83
SBNO1A3KN83 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SBNO1A3KN83 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
SBNO1A3KN83 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC26.46■■□□□ 1.83
SBNO1A3KN83 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC26.46■■□□□ 1.83
SBNO1A3KN83 NPAP1P7-201ENST00000613027 823 ntBASIC26.46■■□□□ 1.83
SBNO1A3KN83 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC26.45■■□□□ 1.83
SBNO1A3KN83 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC26.45■■□□□ 1.83
SBNO1A3KN83 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC26.45■■□□□ 1.83
SBNO1A3KN83 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
SBNO1A3KN83 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SBNO1A3KN83 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC26.45■■□□□ 1.82
SBNO1A3KN83 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC26.45■■□□□ 1.82
SBNO1A3KN83 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SBNO1A3KN83 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SBNO1A3KN83 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SBNO1A3KN83 Telomerase-vert.1-201ENST00000363312 438 ntBASIC26.45■■□□□ 1.82
SBNO1A3KN83 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC26.45■■□□□ 1.82
SBNO1A3KN83 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
SBNO1A3KN83 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SBNO1A3KN83 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SBNO1A3KN83 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SBNO1A3KN83 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
SBNO1A3KN83 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SBNO1A3KN83 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SBNO1A3KN83 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SBNO1A3KN83 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC26.44■■□□□ 1.82
SBNO1A3KN83 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
SBNO1A3KN83 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
SBNO1A3KN83 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SBNO1A3KN83 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC26.44■■□□□ 1.82
SBNO1A3KN83 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SBNO1A3KN83 SPDYE13P-201ENST00000445314 798 ntBASIC26.44■■□□□ 1.82
SBNO1A3KN83 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC26.44■■□□□ 1.82
SBNO1A3KN83 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SBNO1A3KN83 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
SBNO1A3KN83 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SBNO1A3KN83 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SBNO1A3KN83 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SBNO1A3KN83 SMG8-203ENST00000578922 2178 ntBASIC26.43■■□□□ 1.82
SBNO1A3KN83 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.43■■□□□ 1.82
SBNO1A3KN83 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SBNO1A3KN83 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SBNO1A3KN83 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SBNO1A3KN83 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC26.43■■□□□ 1.82
SBNO1A3KN83 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
SBNO1A3KN83 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SBNO1A3KN83 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC26.43■■□□□ 1.82
SBNO1A3KN83 TSPY21P-201ENST00000433481 731 ntBASIC26.43■■□□□ 1.82
SBNO1A3KN83 TSPY23P-201ENST00000440136 739 ntBASIC26.43■■□□□ 1.82
SBNO1A3KN83 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SBNO1A3KN83 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC26.43■■□□□ 1.82
SBNO1A3KN83 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC26.43■■□□□ 1.82
SBNO1A3KN83 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SBNO1A3KN83 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SBNO1A3KN83 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SBNO1A3KN83 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC26.42■■□□□ 1.82
SBNO1A3KN83 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC26.42■■□□□ 1.82
SBNO1A3KN83 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SBNO1A3KN83 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC26.42■■□□□ 1.82
SBNO1A3KN83 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC26.42■■□□□ 1.82
SBNO1A3KN83 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC26.42■■□□□ 1.82
SBNO1A3KN83 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SBNO1A3KN83 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
SBNO1A3KN83 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC26.42■■□□□ 1.82
SBNO1A3KN83 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms