Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 KRASP1-201ENST00000407852 552 ntBASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AC023632.3-201ENST00000521633 145 ntBASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TCRBV4S1A1TA0A5B7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 TREX1-205ENST00000625293 1783 ntBASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AC124016.1-201ENST00000609552 612 ntBASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AC005332.7-201ENST00000614046 2005 ntBASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TCRBV4S1A1TA0A5B7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 HLA-G-202ENST00000376815 851 ntBASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 HLA-G-203ENST00000376818 1127 ntBASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 Z99916.2-201ENST00000604037 246 ntBASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 AC110285.5-201ENST00000611501 352 ntBASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TCRBV4S1A1TA0A5B7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms