Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 AC063952.2-201ENST00000498792 1227 ntBASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 AC022616.7-201ENST00000525383 220 ntBASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 AL023803.3-201ENST00000615559 522 ntBASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 AL138966.2-201ENST00000621997 464 ntBASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.63■□□□□ 0.41
TRAV17A0A0B4J275 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 AC009237.14-201ENST00000609975 1594 ntBASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 RNF152P1-201ENST00000397754 604 ntBASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 AC117947.1-201ENST00000427448 529 ntBASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 AL353719.1-201ENST00000566847 864 ntBASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV17A0A0B4J275 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 COX11P1-201ENST00000489116 835 ntBASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV17A0A0B4J275 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV17A0A0B4J275 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
TRAV17A0A0B4J275 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV17A0A0B4J275 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV17A0A0B4J275 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV17A0A0B4J275 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV17A0A0B4J275 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV17A0A0B4J275 CKBP1-201ENST00000565489 1086 ntBASIC17.6■□□□□ 0.41
TRAV17A0A0B4J275 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV17A0A0B4J275 AC139887.4-201ENST00000607877 719 ntBASIC17.6■□□□□ 0.41
TRAV17A0A0B4J275 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
TRAV17A0A0B4J275 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV17A0A0B4J275 AL031432.5-201ENST00000641059 760 ntBASIC17.6■□□□□ 0.41
TRAV17A0A0B4J275 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRAV17A0A0B4J275 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV17A0A0B4J275 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV17A0A0B4J275 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV17A0A0B4J275 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV17A0A0B4J275 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV17A0A0B4J275 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms