Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC092437.1-201ENST00000624794 1048 ntBASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 AC009113.1-201ENST00000570267 2443 ntBASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 AC124283.5-201ENST00000624661 1809 ntBASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV5-3A0A0A0MS03 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 AL390719.1-204ENST00000412397 1219 ntBASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 AF201337.1-201ENST00000520239 748 ntBASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 AC105036.2-201ENST00000569468 176 ntBASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 AC073111.5-205ENST00000641717 521 ntBASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV5-3A0A0A0MS03 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV5-3A0A0A0MS03 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 CDCA4P2-201ENST00000441182 718 ntBASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 AC080038.1-201ENST00000611274 1154 ntBASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRBV5-3A0A0A0MS03 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 IRX1P1-201ENST00000438849 1838 ntBASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms