Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV18A0A075B6X5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 AC018470.1-201ENST00000624790 3129 ntBASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 AC006333.2-201ENST00000607957 2099 ntBASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 PHGDH-210ENST00000641115 1638 ntBASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV18A0A075B6X5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV18A0A075B6X5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV18A0A075B6X5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 AC004854.2-201ENST00000608450 1441 ntBASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV18A0A075B6X5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms