Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC108479.2-201ENST00000617314 601 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 AL136221.1-201ENST00000621449 509 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 AC073592.6-201ENST00000624271 415 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 MKKS-204ENST00000639674 192 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CNTN3Q9P232 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CNTN3Q9P232 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CNTN3Q9P232 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CNTN3Q9P232 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CNTN3Q9P232 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CNTN3Q9P232 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 AL133243.2-201ENST00000610331 1621 ntBASIC6.86□□□□□ -1.31
CNTN3Q9P232 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CNTN3Q9P232 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CNTN3Q9P232 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CNTN3Q9P232 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
CNTN3Q9P232 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTN3Q9P232 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTN3Q9P232 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CNTN3Q9P232 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTN3Q9P232 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTN3Q9P232 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTN3Q9P232 CAP1P2-201ENST00000417455 1409 ntBASIC6.85□□□□□ -1.31
CNTN3Q9P232 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTN3Q9P232 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTN3Q9P232 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTN3Q9P232 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CNTN3Q9P232 CCT8P1-201ENST00000413611 1657 ntBASIC6.85□□□□□ -1.31
CNTN3Q9P232 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 RNU5E-5P-201ENST00000365379 116 ntBASIC6.85□□□□□ -1.31
CNTN3Q9P232 MT-TL1-201ENST00000386347 75 ntBASIC6.85□□□□□ -1.31
CNTN3Q9P232 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 SETP9-201ENST00000423837 832 ntBASIC6.85□□□□□ -1.31
CNTN3Q9P232 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 RPL5P7-201ENST00000444235 813 ntBASIC6.85□□□□□ -1.31
CNTN3Q9P232 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 AC010307.1-201ENST00000467206 836 ntBASIC6.85□□□□□ -1.31
CNTN3Q9P232 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 AC117394.1-201ENST00000477323 567 ntBASIC6.85□□□□□ -1.31
CNTN3Q9P232 RN7SL326P-201ENST00000477493 296 ntBASIC6.85□□□□□ -1.31
CNTN3Q9P232 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 MTCYBP18-201ENST00000501056 747 ntBASIC6.85□□□□□ -1.31
CNTN3Q9P232 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 MTCYBP43-201ENST00000513621 740 ntBASIC6.85□□□□□ -1.31
CNTN3Q9P232 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 AC011853.1-201ENST00000518911 454 ntBASIC6.85□□□□□ -1.31
CNTN3Q9P232 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CNTN3Q9P232 AC006512.2-201ENST00000543250 486 ntBASIC6.85□□□□□ -1.31
CNTN3Q9P232 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 MIR4502-201ENST00000580432 81 ntBASIC6.85□□□□□ -1.31
CNTN3Q9P232 AC124916.2-201ENST00000604416 224 ntBASIC6.85□□□□□ -1.31
CNTN3Q9P232 AC131902.3-201ENST00000611767 581 ntBASIC6.85□□□□□ -1.31
CNTN3Q9P232 AL359697.1-201ENST00000624879 587 ntBASIC6.85□□□□□ -1.31
CNTN3Q9P232 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTN3Q9P232 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTN3Q9P232 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTN3Q9P232 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CNTN3Q9P232 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CNTN3Q9P232 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 AL117339.4-201ENST00000608335 7063 ntBASIC6.85□□□□□ -1.31
CNTN3Q9P232 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
CNTN3Q9P232 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CNTN3Q9P232 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CNTN3Q9P232 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CNTN3Q9P232 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 DCAF13P1-201ENST00000495256 1330 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 DBF4P1-201ENST00000412976 1892 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CNTN3Q9P232 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CNTN3Q9P232 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CNTN3Q9P232 RNA5SP346-201ENST00000363541 121 ntBASIC6.84□□□□□ -1.31
CNTN3Q9P232 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
CNTN3Q9P232 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CNTN3Q9P232 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms