Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AL591034.3-201ENST00000605511 685 ntBASIC4.33□□□□□ -1.72
CCDC88CQ9P219 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC88CQ9P219 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 AL513548.1-201ENST00000562904 1724 ntBASIC4.32□□□□□ -1.72
CCDC88CQ9P219 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 ZFRP1-201ENST00000457579 2970 ntBASIC4.32□□□□□ -1.72
CCDC88CQ9P219 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 SNORA71.2-201ENST00000364941 134 ntBASIC4.32□□□□□ -1.72
CCDC88CQ9P219 RNA5SP372-201ENST00000390836 115 ntBASIC4.32□□□□□ -1.72
CCDC88CQ9P219 UQCRBP1-201ENST00000421129 336 ntBASIC4.32□□□□□ -1.72
CCDC88CQ9P219 RPEP3-201ENST00000425462 676 ntBASIC4.32□□□□□ -1.72
CCDC88CQ9P219 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 IGLVIV-65-201ENST00000517313 360 ntBASIC4.32□□□□□ -1.72
CCDC88CQ9P219 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 AC100847.1-201ENST00000611316 481 ntBASIC4.32□□□□□ -1.72
CCDC88CQ9P219 AL353726.1-201ENST00000614041 1000 ntBASIC4.32□□□□□ -1.72
CCDC88CQ9P219 BNIP3P41-202ENST00000616656 861 ntBASIC4.32□□□□□ -1.72
CCDC88CQ9P219 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 AC068724.3-201ENST00000625906 87 ntBASIC4.32□□□□□ -1.72
CCDC88CQ9P219 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC88CQ9P219 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 AL355852.1-201ENST00000454081 1771 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 AC005261.4-201ENST00000600047 1385 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 CASC19-204ENST00000641001 2055 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 MIR383-201ENST00000362257 73 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 NPM1P25-201ENST00000429734 854 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 RPS29P17-201ENST00000430795 166 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 FHP1-201ENST00000442741 703 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 AK3P4-201ENST00000504283 583 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 Y_RNA.719-201ENST00000517156 106 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 AC009643.1-201ENST00000532030 391 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 AC087477.6-201ENST00000559595 843 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 EOGT-210ENST00000615922 1931 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 AC108467.2-201ENST00000617640 1597 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 IGKV7-3-201ENST00000357453 298 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 AC062016.2-201ENST00000420950 676 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 AK4P6-201ENST00000505168 528 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 CYCSP29-201ENST00000533731 318 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 RPL26P30-202ENST00000602923 645 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.31□□□□□ -1.72
CCDC88CQ9P219 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
CCDC88CQ9P219 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC88CQ9P219 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC88CQ9P219 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC88CQ9P219 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC88CQ9P219 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC88CQ9P219 UGT2B26P-201ENST00000508672 1613 ntBASIC4.3□□□□□ -1.72
CCDC88CQ9P219 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC88CQ9P219 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC88CQ9P219 OR4K17-201ENST00000315543 1032 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms