Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RPS26P39-201ENST00000469206 341 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 HMGB3P13-201ENST00000511263 607 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 SCARNA21.2-201ENST00000516600 166 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AC008694.2-201ENST00000517591 306 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AP001880.2-201ENST00000538233 448 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 GLRXP2-201ENST00000555594 321 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 FAM106CP-201ENST00000582212 507 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 BNIP3P32-201ENST00000600015 554 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AP002799.1-201ENST00000623552 423 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AC079298.2-201ENST00000623885 459 ntBASIC4.31□□□□□ -1.72
VAPAQ9P0L0 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
VAPAQ9P0L0 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 RNU1-108P-201ENST00000362556 161 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 RNA5SP191-201ENST00000362585 102 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 RNA5SP305-201ENST00000362665 119 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 RNU1-44P-201ENST00000384453 163 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 MT-RNR1-201ENST00000389680 954 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 RN7SKP216-201ENST00000411050 312 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 GAPDHP49-201ENST00000421421 961 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 SKP1P3-201ENST00000429280 487 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 RBMY2QP-201ENST00000429799 1147 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 NRBF2P3-201ENST00000432731 865 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 SCARNA10-201ENST00000459255 330 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 RPL7AP28-201ENST00000464513 571 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 AC006499.3-201ENST00000506077 748 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 AP001960.1-201ENST00000506494 658 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 EIF4EP5-201ENST00000528228 640 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 AC021006.3-201ENST00000530771 192 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 MTND6P33-201ENST00000571794 183 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 AL023881.1-201ENST00000621088 301 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 AP002967.1-201ENST00000624203 539 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 MIR4302-201ENST00000638058 60 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 NXPH1-205ENST00000602349 1953 ntBASIC4.3□□□□□ -1.72
VAPAQ9P0L0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.3□□□□□ -1.72
VAPAQ9P0L0 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 INTS6P1-201ENST00000504674 2530 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 AC067945.1-201ENST00000342609 618 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 VN1R8P-201ENST00000407739 893 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 AC004074.1-201ENST00000421810 1063 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 EIF4EP1-201ENST00000422311 642 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 RPS12P5-201ENST00000423449 371 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 CENPIP1-201ENST00000425713 902 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 RPL23AP25-201ENST00000430973 463 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 MAPRE1P3-201ENST00000435438 796 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 RPL10P17-201ENST00000453852 316 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 RPS26P28-201ENST00000470806 348 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 AC104763.1-201ENST00000475274 360 ntBASIC4.29□□□□□ -1.72
VAPAQ9P0L0 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.29□□□□□ -1.72
VAPAQ9P0L0 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms