Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM55Q9BYV6 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM55Q9BYV6 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM55Q9BYV6 AP001541.1-201ENST00000623322 1904 ntBASIC6.21□□□□□ -1.42
TRIM55Q9BYV6 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM55Q9BYV6 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM55Q9BYV6 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM55Q9BYV6 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
TRIM55Q9BYV6 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 HDAC1P2-201ENST00000453661 1398 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AL355834.1-201ENST00000556602 3965 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AGR3-202ENST00000402239 563 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 RN7SKP273-201ENST00000411392 314 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AL031779.1-201ENST00000415663 330 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 RBMY2KP-201ENST00000418221 992 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 IFNNP1-201ENST00000429219 553 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 MED14P1-201ENST00000430517 648 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 B3GNT2P1-201ENST00000434960 952 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AL353706.1-201ENST00000436728 494 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AC241584.1-201ENST00000438469 1241 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 ELOCP10-201ENST00000440624 327 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AP000936.2-201ENST00000447151 681 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AC112187.1-201ENST00000455837 479 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 RN7SL552P-201ENST00000462094 276 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AC091874.2-201ENST00000505889 720 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 HMGB1P28-201ENST00000507778 552 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 SNORA74.1-201ENST00000516320 180 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 ROCK1P1-201ENST00000573767 549 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AC245052.7-201ENST00000601161 359 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 ELOCP34-201ENST00000604436 327 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AL133243.1-201ENST00000614487 366 ntBASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM55Q9BYV6 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 AC025125.1-201ENST00000624743 1922 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 CASC19-246ENST00000641625 1606 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 RNA5SP433-201ENST00000364491 114 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 RNU1-84P-201ENST00000365447 164 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 RPL23AP29-201ENST00000397284 453 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 MTCO3P31-201ENST00000405526 789 ntBASIC6.19□□□□□ -1.42
TRIM55Q9BYV6 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms