Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 AC100757.1-201ENST00000616872 1835 ntBASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CTHRC1Q96CG8 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 RN7SKP145-201ENST00000363291 303 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 RNA5SP132-201ENST00000364725 118 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 RN7SKP124-201ENST00000364730 341 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 MIR137-201ENST00000385223 102 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 PPIAP9-201ENST00000403866 498 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 RNU4-72P-201ENST00000410754 173 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AL133482.1-201ENST00000415988 498 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 MTCO1P11-201ENST00000429111 1528 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 RPL12P17-201ENST00000432393 498 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 NPM1P18-201ENST00000434232 732 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AL359265.1-201ENST00000440296 795 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AL929288.2-201ENST00000446368 407 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AC018638.3-201ENST00000461273 132 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AC084024.2-201ENST00000503480 791 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 OR5H4P-201ENST00000510851 923 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 RNU6-1129P-201ENST00000515964 104 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 RNA5SP362-201ENST00000516048 118 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 SCARNA20.4-201ENST00000516969 131 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 PDCL2P2-201ENST00000533651 189 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 YWHABP2-201ENST00000540201 713 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AC010198.2-201ENST00000550612 259 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AC044913.1-201ENST00000557200 430 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 MIR3176-201ENST00000582210 90 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 MIR7853-201ENST00000584820 132 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AC068790.7-201ENST00000602347 528 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AL022161.1-201ENST00000604390 213 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AL392112.1-201ENST00000605115 829 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AC012557.2-201ENST00000605919 418 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AL157770.1-201ENST00000623049 439 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AP000676.3-201ENST00000623299 569 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AC135068.5-201ENST00000624197 983 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AC120338.1-201ENST00000625074 1541 ntBASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CTHRC1Q96CG8 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 DNM1P47-203ENST00000571780 12667 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 RLIMP2-201ENST00000427891 1563 ntBASIC5.09□□□□□ -1.59
CTHRC1Q96CG8 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms