Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.32□□□□□ -1.72
RFX4Q33E94 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.32□□□□□ -1.72
RFX4Q33E94 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.32□□□□□ -1.72
RFX4Q33E94 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.32□□□□□ -1.72
RFX4Q33E94 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.32□□□□□ -1.72
RFX4Q33E94 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.32□□□□□ -1.72
RFX4Q33E94 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.32□□□□□ -1.72
RFX4Q33E94 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.32□□□□□ -1.72
RFX4Q33E94 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.32□□□□□ -1.72
RFX4Q33E94 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RFX4Q33E94 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFX4Q33E94 AC099654.2-201ENST00000433031 1980 ntBASIC4.32□□□□□ -1.72
RFX4Q33E94 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RFX4Q33E94 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RFX4Q33E94 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RFX4Q33E94 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFX4Q33E94 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.32□□□□□ -1.72
RFX4Q33E94 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RFX4Q33E94 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RFX4Q33E94 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFX4Q33E94 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
RFX4Q33E94 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RFX4Q33E94 MTCO1P11-201ENST00000429111 1528 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RFX4Q33E94 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFX4Q33E94 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RFX4Q33E94 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RFX4Q33E94 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFX4Q33E94 AC093535.2-201ENST00000624769 2326 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFX4Q33E94 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFX4Q33E94 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFX4Q33E94 RPL23P2-201ENST00000320371 421 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 RNU6-1331P-201ENST00000363658 106 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 RNU1-44P-201ENST00000384453 163 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 AC104297.1-201ENST00000393779 870 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFX4Q33E94 AP002530.1-201ENST00000405705 684 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RFX4Q33E94 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.31□□□□□ -1.72
RFX4Q33E94 AL355433.1-201ENST00000422804 300 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 MAPRE1P3-201ENST00000435438 796 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 GEMIN8P3-201ENST00000445417 720 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 OR51K1P-201ENST00000510214 950 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 HMGB3P13-201ENST00000511263 607 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.31□□□□□ -1.72
RFX4Q33E94 AC004980.4-201ENST00000513375 203 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.31□□□□□ -1.72
RFX4Q33E94 RNA5SP228-201ENST00000516232 133 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.31□□□□□ -1.72
RFX4Q33E94 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.31□□□□□ -1.72
RFX4Q33E94 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.31□□□□□ -1.72
RFX4Q33E94 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.31□□□□□ -1.72
RFX4Q33E94 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RFX4Q33E94 SULT1C2P2-201ENST00000562517 294 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 SNORD39.2-201ENST00000579995 76 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.31□□□□□ -1.72
RFX4Q33E94 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.31□□□□□ -1.72
RFX4Q33E94 LINC01739-205ENST00000641890 573 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RFX4Q33E94 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.31□□□□□ -1.72
RFX4Q33E94 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFX4Q33E94 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFX4Q33E94 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RFX4Q33E94 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
RFX4Q33E94 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RFX4Q33E94 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RFX4Q33E94 AL590763.1-201ENST00000398297 1545 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 VPS35P1-201ENST00000563400 1518 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 AC015813.6-201ENST00000624409 5808 ntBASIC4.31□□□□□ -1.72
RFX4Q33E94 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RFX4Q33E94 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RFX4Q33E94 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RFX4Q33E94 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RFX4Q33E94 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
RFX4Q33E94 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
RFX4Q33E94 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RFX4Q33E94 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RFX4Q33E94 RHOT1P2-201ENST00000366423 333 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 MIR93-201ENST00000385024 80 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 AL512430.2-201ENST00000406786 339 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 VN1R8P-201ENST00000407739 893 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 DPPA2P3-201ENST00000411853 655 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 AC073136.2-201ENST00000417282 849 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RFX4Q33E94 RPL7P11-201ENST00000437586 658 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.3□□□□□ -1.72
RFX4Q33E94 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.3□□□□□ -1.72
RFX4Q33E94 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.3□□□□□ -1.72
RFX4Q33E94 RPL10P17-201ENST00000453852 316 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 AL133244.1-201ENST00000456007 258 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 RPS26P39-201ENST00000469206 341 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 AC140172.1-201ENST00000502928 141 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.3□□□□□ -1.72
RFX4Q33E94 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.3□□□□□ -1.72
RFX4Q33E94 RNU1-6P-201ENST00000516290 144 ntBASIC4.3□□□□□ -1.72
RFX4Q33E94 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.3□□□□□ -1.72
RFX4Q33E94 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.3□□□□□ -1.72
RFX4Q33E94 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms