Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PRKDCP78527 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC3.09□□□□□ -1.91
PRKDCP78527 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.09□□□□□ -1.91
PRKDCP78527 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PRKDCP78527 AL442128.2-201ENST00000620246 1824 ntBASIC3.09□□□□□ -1.91
PRKDCP78527 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
PRKDCP78527 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PRKDCP78527 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PRKDCP78527 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
PRKDCP78527 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
PRKDCP78527 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
PRKDCP78527 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.09□□□□□ -1.91
PRKDCP78527 AC105074.1-201ENST00000623380 3095 ntBASIC3.09□□□□□ -1.91
PRKDCP78527 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
PRKDCP78527 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC3.09□□□□□ -1.92
PRKDCP78527 CTSL3P-202ENST00000412179 788 ntBASIC3.09□□□□□ -1.92
PRKDCP78527 SETP14-201ENST00000497538 873 ntBASIC3.09□□□□□ -1.92
PRKDCP78527 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.09□□□□□ -1.92
PRKDCP78527 RNA5SP73-201ENST00000516744 108 ntBASIC3.09□□□□□ -1.92
PRKDCP78527 RN7SKP57-201ENST00000517248 293 ntBASIC3.09□□□□□ -1.92
PRKDCP78527 NDUFA5P2-201ENST00000519723 344 ntBASIC3.09□□□□□ -1.92
PRKDCP78527 AC027309.2-201ENST00000520566 192 ntBASIC3.09□□□□□ -1.92
PRKDCP78527 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC3.09□□□□□ -1.92
PRKDCP78527 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.09□□□□□ -1.92
PRKDCP78527 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.09□□□□□ -1.92
PRKDCP78527 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PRKDCP78527 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.09□□□□□ -1.92
PRKDCP78527 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PRKDCP78527 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
PRKDCP78527 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PRKDCP78527 USP9YP4-201ENST00000424401 1745 ntBASIC3.09□□□□□ -1.92
PRKDCP78527 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC3.09□□□□□ -1.92
PRKDCP78527 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC3.09□□□□□ -1.92
PRKDCP78527 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
PRKDCP78527 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
PRKDCP78527 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC3.09□□□□□ -1.92
PRKDCP78527 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC3.09□□□□□ -1.92
PRKDCP78527 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PRKDCP78527 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.92
PRKDCP78527 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC3.09□□□□□ -1.92
PRKDCP78527 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
PRKDCP78527 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC3.09□□□□□ -1.92
PRKDCP78527 NACA3P-201ENST00000359690 648 ntBASIC3.08□□□□□ -1.92
PRKDCP78527 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PRKDCP78527 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.08□□□□□ -1.92
PRKDCP78527 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC3.08□□□□□ -1.92
PRKDCP78527 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.08□□□□□ -1.92
PRKDCP78527 GNRHR2P1-201ENST00000555315 631 ntBASIC3.08□□□□□ -1.92
PRKDCP78527 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
PRKDCP78527 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 AL603750.1-201ENST00000624216 1717 ntBASIC3.08□□□□□ -1.92
PRKDCP78527 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC3.08□□□□□ -1.92
PRKDCP78527 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC3.08□□□□□ -1.92
PRKDCP78527 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 ENSAP1-201ENST00000392855 326 ntBASIC3.08□□□□□ -1.92
PRKDCP78527 NPM1P26-201ENST00000426339 738 ntBASIC3.08□□□□□ -1.92
PRKDCP78527 AC017083.1-201ENST00000428093 483 ntBASIC3.08□□□□□ -1.92
PRKDCP78527 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.08□□□□□ -1.92
PRKDCP78527 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.08□□□□□ -1.92
PRKDCP78527 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.08□□□□□ -1.92
PRKDCP78527 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC3.08□□□□□ -1.92
PRKDCP78527 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC3.08□□□□□ -1.92
PRKDCP78527 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
PRKDCP78527 AC068733.2-201ENST00000605434 1418 ntBASIC3.08□□□□□ -1.92
PRKDCP78527 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC3.08□□□□□ -1.92
PRKDCP78527 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 AC009229.4-201ENST00000623854 1947 ntBASIC3.08□□□□□ -1.92
PRKDCP78527 RPS20P4-201ENST00000461659 355 ntBASIC3.08□□□□□ -1.92
PRKDCP78527 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC3.08□□□□□ -1.92
PRKDCP78527 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
PRKDCP78527 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
PRKDCP78527 AC092111.2-201ENST00000611627 1414 ntBASIC3.08□□□□□ -1.92
PRKDCP78527 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
PRKDCP78527 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC3.08□□□□□ -1.92
PRKDCP78527 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 AL355852.1-201ENST00000454081 1771 ntBASIC3.08□□□□□ -1.92
PRKDCP78527 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 AC015813.6-201ENST00000624409 5808 ntBASIC3.08□□□□□ -1.92
PRKDCP78527 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PRKDCP78527 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PRKDCP78527 RNU6-301P-201ENST00000384277 107 ntBASIC3.08□□□□□ -1.92
PRKDCP78527 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.08□□□□□ -1.92
PRKDCP78527 AL391219.1-201ENST00000422570 483 ntBASIC3.08□□□□□ -1.92
PRKDCP78527 AP000563.1-201ENST00000490865 758 ntBASIC3.08□□□□□ -1.92
PRKDCP78527 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC3.08□□□□□ -1.92
PRKDCP78527 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms