Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.09□□□□□ -1.75
ACTBP60709 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.09□□□□□ -1.75
ACTBP60709 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.09□□□□□ -1.75
ACTBP60709 PSMC1P13-201ENST00000458195 985 ntBASIC4.09□□□□□ -1.75
ACTBP60709 ATP5G1P3-201ENST00000463301 410 ntBASIC4.09□□□□□ -1.75
ACTBP60709 RPS26P28-201ENST00000470806 348 ntBASIC4.09□□□□□ -1.75
ACTBP60709 MTND6P6-201ENST00000478031 263 ntBASIC4.09□□□□□ -1.75
ACTBP60709 AC090142.2-201ENST00000483263 416 ntBASIC4.09□□□□□ -1.75
ACTBP60709 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.09□□□□□ -1.75
ACTBP60709 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.09□□□□□ -1.75
ACTBP60709 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.09□□□□□ -1.75
ACTBP60709 IGLV2-28-201ENST00000520681 304 ntBASIC4.09□□□□□ -1.75
ACTBP60709 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ACTBP60709 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ACTBP60709 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.09□□□□□ -1.75
ACTBP60709 RPL7P50-201ENST00000600588 727 ntBASIC4.09□□□□□ -1.75
ACTBP60709 AC005377.1-201ENST00000605126 456 ntBASIC4.09□□□□□ -1.75
ACTBP60709 AC026368.1-201ENST00000614934 690 ntBASIC4.09□□□□□ -1.75
ACTBP60709 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.09□□□□□ -1.75
ACTBP60709 AC087821.1-201ENST00000623639 567 ntBASIC4.09□□□□□ -1.75
ACTBP60709 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ACTBP60709 RARSP1-201ENST00000542842 1418 ntBASIC4.09□□□□□ -1.75
ACTBP60709 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ACTBP60709 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.08□□□□□ -1.76
ACTBP60709 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ACTBP60709 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
ACTBP60709 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
ACTBP60709 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ACTBP60709 RNU6-171P-201ENST00000384354 107 ntBASIC4.08□□□□□ -1.76
ACTBP60709 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.08□□□□□ -1.76
ACTBP60709 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.08□□□□□ -1.76
ACTBP60709 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ACTBP60709 RN7SKP216-201ENST00000411050 312 ntBASIC4.08□□□□□ -1.76
ACTBP60709 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.08□□□□□ -1.76
ACTBP60709 RPL12P43-201ENST00000420608 499 ntBASIC4.08□□□□□ -1.76
ACTBP60709 DDX39BP1-205ENST00000422507 192 ntBASIC4.08□□□□□ -1.76
ACTBP60709 RPL7P57-201ENST00000423238 740 ntBASIC4.08□□□□□ -1.76
ACTBP60709 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.08□□□□□ -1.76
ACTBP60709 DYNLL1P7-201ENST00000429273 258 ntBASIC4.08□□□□□ -1.76
ACTBP60709 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.08□□□□□ -1.76
ACTBP60709 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.08□□□□□ -1.76
ACTBP60709 CNOT7P2-201ENST00000441051 832 ntBASIC4.08□□□□□ -1.76
ACTBP60709 KNOP1P3-201ENST00000446933 426 ntBASIC4.08□□□□□ -1.76
ACTBP60709 RN7SL222P-201ENST00000476452 299 ntBASIC4.08□□□□□ -1.76
ACTBP60709 AC116562.1-201ENST00000485355 781 ntBASIC4.08□□□□□ -1.76
ACTBP60709 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.08□□□□□ -1.76
ACTBP60709 SNRPCP2-201ENST00000504370 475 ntBASIC4.08□□□□□ -1.76
ACTBP60709 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.08□□□□□ -1.76
ACTBP60709 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ACTBP60709 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.08□□□□□ -1.76
ACTBP60709 MYL12AP1-201ENST00000518490 515 ntBASIC4.08□□□□□ -1.76
ACTBP60709 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.08□□□□□ -1.76
ACTBP60709 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.08□□□□□ -1.76
ACTBP60709 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.08□□□□□ -1.76
ACTBP60709 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ACTBP60709 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.08□□□□□ -1.76
ACTBP60709 AL121834.1-201ENST00000572284 509 ntBASIC4.08□□□□□ -1.76
ACTBP60709 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.08□□□□□ -1.76
ACTBP60709 FAM106CP-201ENST00000582212 507 ntBASIC4.08□□□□□ -1.76
ACTBP60709 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.08□□□□□ -1.76
ACTBP60709 AC008759.1-201ENST00000589783 983 ntBASIC4.08□□□□□ -1.76
ACTBP60709 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.08□□□□□ -1.76
ACTBP60709 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.08□□□□□ -1.76
ACTBP60709 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.08□□□□□ -1.76
ACTBP60709 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.08□□□□□ -1.76
ACTBP60709 AL359757.1-201ENST00000623176 255 ntBASIC4.08□□□□□ -1.76
ACTBP60709 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
ACTBP60709 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.08□□□□□ -1.76
ACTBP60709 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ACTBP60709 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
ACTBP60709 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ACTBP60709 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.08□□□□□ -1.76
ACTBP60709 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
ACTBP60709 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
ACTBP60709 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ACTBP60709 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ACTBP60709 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
ACTBP60709 AL590763.1-201ENST00000398297 1545 ntBASIC4.07□□□□□ -1.76
ACTBP60709 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
ACTBP60709 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.07□□□□□ -1.76
ACTBP60709 CIR1P2-201ENST00000514821 1342 ntBASIC4.07□□□□□ -1.76
ACTBP60709 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ACTBP60709 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
ACTBP60709 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
ACTBP60709 U3.36-201ENST00000408418 213 ntBASIC4.07□□□□□ -1.76
ACTBP60709 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.07□□□□□ -1.76
ACTBP60709 GTF3AP1-201ENST00000416942 1004 ntBASIC4.07□□□□□ -1.76
ACTBP60709 DPY19L1P2-201ENST00000426647 915 ntBASIC4.07□□□□□ -1.76
ACTBP60709 RPL12P28-201ENST00000430852 489 ntBASIC4.07□□□□□ -1.76
ACTBP60709 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.07□□□□□ -1.76
ACTBP60709 AC000111.2-201ENST00000448200 210 ntBASIC4.07□□□□□ -1.76
ACTBP60709 AC092647.2-201ENST00000452998 253 ntBASIC4.07□□□□□ -1.76
ACTBP60709 AL645939.1-201ENST00000453429 797 ntBASIC4.07□□□□□ -1.76
ACTBP60709 AC097484.1-201ENST00000471148 389 ntBASIC4.07□□□□□ -1.76
ACTBP60709 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.07□□□□□ -1.76
ACTBP60709 AC018797.3-201ENST00000513388 1241 ntBASIC4.07□□□□□ -1.76
ACTBP60709 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.07□□□□□ -1.76
ACTBP60709 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ACTBP60709 SMARCE1P4-201ENST00000523647 241 ntBASIC4.07□□□□□ -1.76
ACTBP60709 AC022832.1-201ENST00000530718 645 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms