Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC021242.1-201ENST00000507315 2035 ntBASIC4.85□□□□□ -1.63
CDH13P55290 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH13P55290 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH13P55290 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CDH13P55290 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
CDH13P55290 SNORA17.1-201ENST00000362945 126 ntBASIC4.85□□□□□ -1.63
CDH13P55290 SNORA73.1-201ENST00000363107 205 ntBASIC4.85□□□□□ -1.63
CDH13P55290 RN7SKP162-201ENST00000363605 345 ntBASIC4.85□□□□□ -1.63
CDH13P55290 AL078599.1-201ENST00000402075 293 ntBASIC4.85□□□□□ -1.63
CDH13P55290 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH13P55290 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH13P55290 NPM1P4-201ENST00000414095 812 ntBASIC4.85□□□□□ -1.63
CDH13P55290 MTCO3P4-201ENST00000419236 787 ntBASIC4.85□□□□□ -1.63
CDH13P55290 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH13P55290 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.85□□□□□ -1.63
CDH13P55290 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH13P55290 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.85□□□□□ -1.63
CDH13P55290 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH13P55290 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.85□□□□□ -1.63
CDH13P55290 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH13P55290 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH13P55290 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH13P55290 RPL6P5-201ENST00000445678 828 ntBASIC4.85□□□□□ -1.63
CDH13P55290 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH13P55290 RPL7P55-201ENST00000450522 746 ntBASIC4.85□□□□□ -1.63
CDH13P55290 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.85□□□□□ -1.63
CDH13P55290 RPL32P14-201ENST00000463196 378 ntBASIC4.85□□□□□ -1.63
CDH13P55290 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.85□□□□□ -1.63
CDH13P55290 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH13P55290 AC112518.2-201ENST00000508565 425 ntBASIC4.85□□□□□ -1.63
CDH13P55290 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
CDH13P55290 C1DP5-201ENST00000525775 383 ntBASIC4.85□□□□□ -1.63
CDH13P55290 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH13P55290 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH13P55290 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH13P55290 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.85□□□□□ -1.63
CDH13P55290 CYCSP40-201ENST00000575927 294 ntBASIC4.85□□□□□ -1.63
CDH13P55290 AC124283.4-201ENST00000581815 456 ntBASIC4.85□□□□□ -1.63
CDH13P55290 AC105254.2-201ENST00000603636 436 ntBASIC4.85□□□□□ -1.63
CDH13P55290 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.85□□□□□ -1.63
CDH13P55290 AC112503.2-201ENST00000609005 552 ntBASIC4.85□□□□□ -1.63
CDH13P55290 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH13P55290 AC068880.4-201ENST00000623082 495 ntBASIC4.85□□□□□ -1.63
CDH13P55290 AC099494.2-201ENST00000623371 978 ntBASIC4.85□□□□□ -1.63
CDH13P55290 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CDH13P55290 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CDH13P55290 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDH13P55290 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH13P55290 DDX18P4-201ENST00000511690 1966 ntBASIC4.85□□□□□ -1.63
CDH13P55290 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDH13P55290 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CDH13P55290 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH13P55290 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH13P55290 SALL4P2-201ENST00000423288 2910 ntBASIC4.84□□□□□ -1.63
CDH13P55290 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH13P55290 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH13P55290 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH13P55290 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH13P55290 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH13P55290 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH13P55290 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH13P55290 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH13P55290 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CDH13P55290 RNA5SP435-201ENST00000364044 108 ntBASIC4.84□□□□□ -1.63
CDH13P55290 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH13P55290 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH13P55290 MIR143-201ENST00000385300 106 ntBASIC4.84□□□□□ -1.63
CDH13P55290 U3.25-201ENST00000391209 220 ntBASIC4.84□□□□□ -1.63
CDH13P55290 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH13P55290 SLC35E1P1-201ENST00000419313 864 ntBASIC4.84□□□□□ -1.63
CDH13P55290 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH13P55290 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH13P55290 SDR42E1P3-201ENST00000438345 502 ntBASIC4.84□□□□□ -1.63
CDH13P55290 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH13P55290 AC016724.1-201ENST00000453215 421 ntBASIC4.84□□□□□ -1.63
CDH13P55290 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH13P55290 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH13P55290 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH13P55290 OR2AO1P-201ENST00000476497 403 ntBASIC4.84□□□□□ -1.63
CDH13P55290 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDH13P55290 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH13P55290 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH13P55290 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH13P55290 RN7SL591P-201ENST00000496150 292 ntBASIC4.84□□□□□ -1.63
CDH13P55290 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH13P55290 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDH13P55290 RNU6-334P-201ENST00000517072 102 ntBASIC4.84□□□□□ -1.63
CDH13P55290 IGKV2D-10-201ENST00000520194 281 ntBASIC4.84□□□□□ -1.63
CDH13P55290 BUD31P1-201ENST00000521828 359 ntBASIC4.84□□□□□ -1.63
CDH13P55290 IGKV2-18-201ENST00000522607 343 ntBASIC4.84□□□□□ -1.63
CDH13P55290 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH13P55290 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.84□□□□□ -1.63
CDH13P55290 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH13P55290 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.84□□□□□ -1.63
CDH13P55290 AC104687.2-201ENST00000604442 342 ntBASIC4.84□□□□□ -1.63
CDH13P55290 AC106858.1-201ENST00000637497 429 ntBASIC4.84□□□□□ -1.63
CDH13P55290 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CDH13P55290 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.84□□□□□ -1.63
CDH13P55290 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CDH13P55290 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms