Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RARSP1-201ENST00000542842 1418 ntBASIC5.65□□□□□ -1.51
NEK3P51956 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.65□□□□□ -1.51
NEK3P51956 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
NEK3P51956 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NEK3P51956 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
NEK3P51956 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NEK3P51956 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.64□□□□□ -1.51
NEK3P51956 AL034370.1-201ENST00000397254 1590 ntBASIC5.64□□□□□ -1.51
NEK3P51956 AL450326.2-201ENST00000421913 1962 ntBASIC5.64□□□□□ -1.51
NEK3P51956 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NEK3P51956 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.64□□□□□ -1.51
NEK3P51956 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NEK3P51956 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NEK3P51956 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NEK3P51956 RNU4-51P-201ENST00000364206 140 ntBASIC5.64□□□□□ -1.51
NEK3P51956 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.64□□□□□ -1.51
NEK3P51956 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.64□□□□□ -1.51
NEK3P51956 RNU6-146P-201ENST00000384602 108 ntBASIC5.64□□□□□ -1.51
NEK3P51956 ANAPC10P1-201ENST00000395991 556 ntBASIC5.64□□□□□ -1.51
NEK3P51956 RN7SKP59-201ENST00000410520 314 ntBASIC5.64□□□□□ -1.51
NEK3P51956 NPM1P4-201ENST00000414095 812 ntBASIC5.64□□□□□ -1.51
NEK3P51956 BTF3P8-201ENST00000414577 526 ntBASIC5.64□□□□□ -1.51
NEK3P51956 OR13Z1P-201ENST00000416141 834 ntBASIC5.64□□□□□ -1.51
NEK3P51956 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.64□□□□□ -1.51
NEK3P51956 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.64□□□□□ -1.51
NEK3P51956 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
NEK3P51956 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NEK3P51956 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.64□□□□□ -1.51
NEK3P51956 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.64□□□□□ -1.51
NEK3P51956 RPS26P30-201ENST00000443431 335 ntBASIC5.64□□□□□ -1.51
NEK3P51956 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NEK3P51956 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.64□□□□□ -1.51
NEK3P51956 RN7SL51P-201ENST00000468230 285 ntBASIC5.64□□□□□ -1.51
NEK3P51956 RPL35AP19-201ENST00000469425 329 ntBASIC5.64□□□□□ -1.51
NEK3P51956 AC104689.1-201ENST00000473356 768 ntBASIC5.64□□□□□ -1.51
NEK3P51956 RN7SL583P-201ENST00000475692 287 ntBASIC5.64□□□□□ -1.51
NEK3P51956 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.64□□□□□ -1.51
NEK3P51956 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.64□□□□□ -1.51
NEK3P51956 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.64□□□□□ -1.51
NEK3P51956 AC118282.2-201ENST00000508739 374 ntBASIC5.64□□□□□ -1.51
NEK3P51956 AC008885.2-201ENST00000509506 930 ntBASIC5.64□□□□□ -1.51
NEK3P51956 RNU6-941P-201ENST00000516346 108 ntBASIC5.64□□□□□ -1.51
NEK3P51956 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.64□□□□□ -1.51
NEK3P51956 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.64□□□□□ -1.51
NEK3P51956 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.64□□□□□ -1.51
NEK3P51956 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.64□□□□□ -1.51
NEK3P51956 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.64□□□□□ -1.51
NEK3P51956 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.64□□□□□ -1.51
NEK3P51956 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.64□□□□□ -1.51
NEK3P51956 MTCYBP23-201ENST00000558717 1102 ntBASIC5.64□□□□□ -1.51
NEK3P51956 BPTFP1-201ENST00000579209 492 ntBASIC5.64□□□□□ -1.51
NEK3P51956 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.64□□□□□ -1.51
NEK3P51956 AC110743.1-201ENST00000584870 478 ntBASIC5.64□□□□□ -1.51
NEK3P51956 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.64□□□□□ -1.51
NEK3P51956 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.64□□□□□ -1.51
NEK3P51956 AC123767.1-202ENST00000620407 817 ntBASIC5.64□□□□□ -1.51
NEK3P51956 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.64□□□□□ -1.51
NEK3P51956 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.64□□□□□ -1.51
NEK3P51956 AC090971.4-201ENST00000560291 1800 ntBASIC5.64□□□□□ -1.51
NEK3P51956 AC079097.1-201ENST00000512187 1399 ntBASIC5.64□□□□□ -1.51
NEK3P51956 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
NEK3P51956 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NEK3P51956 SGO1P1-201ENST00000603525 1447 ntBASIC5.64□□□□□ -1.51
NEK3P51956 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NEK3P51956 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NEK3P51956 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NEK3P51956 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NEK3P51956 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.63□□□□□ -1.51
NEK3P51956 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
NEK3P51956 RN7SKP162-201ENST00000363605 345 ntBASIC5.63□□□□□ -1.51
NEK3P51956 RNU1-87P-201ENST00000363727 170 ntBASIC5.63□□□□□ -1.51
NEK3P51956 MIR16-1-201ENST00000385271 89 ntBASIC5.63□□□□□ -1.51
NEK3P51956 SNORA68.2-201ENST00000391263 128 ntBASIC5.63□□□□□ -1.51
NEK3P51956 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
NEK3P51956 TMSB4XP8-201ENST00000402089 135 ntBASIC5.63□□□□□ -1.51
NEK3P51956 RPL31P52-201ENST00000407532 367 ntBASIC5.63□□□□□ -1.51
NEK3P51956 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.63□□□□□ -1.51
NEK3P51956 TMSB4XP6-201ENST00000415187 135 ntBASIC5.63□□□□□ -1.51
NEK3P51956 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.63□□□□□ -1.51
NEK3P51956 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.63□□□□□ -1.51
NEK3P51956 RPL12P34-201ENST00000424532 479 ntBASIC5.63□□□□□ -1.51
NEK3P51956 TMSB4XP1-201ENST00000424567 135 ntBASIC5.63□□□□□ -1.51
NEK3P51956 AL158073.1-201ENST00000426848 1104 ntBASIC5.63□□□□□ -1.51
NEK3P51956 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.63□□□□□ -1.51
NEK3P51956 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NEK3P51956 HMGB1P45-201ENST00000435986 653 ntBASIC5.63□□□□□ -1.51
NEK3P51956 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.63□□□□□ -1.51
NEK3P51956 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.63□□□□□ -1.51
NEK3P51956 AC073465.2-201ENST00000440938 498 ntBASIC5.63□□□□□ -1.51
NEK3P51956 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
NEK3P51956 AC019185.1-201ENST00000442718 389 ntBASIC5.63□□□□□ -1.51
NEK3P51956 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.63□□□□□ -1.51
NEK3P51956 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.63□□□□□ -1.51
NEK3P51956 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.63□□□□□ -1.51
NEK3P51956 RN7SL177P-201ENST00000476596 299 ntBASIC5.63□□□□□ -1.51
NEK3P51956 ATP5LP5-201ENST00000483050 299 ntBASIC5.63□□□□□ -1.51
NEK3P51956 RN7SL547P-201ENST00000490793 290 ntBASIC5.63□□□□□ -1.51
NEK3P51956 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
NEK3P51956 AC010460.2-201ENST00000509054 677 ntBASIC5.63□□□□□ -1.51
NEK3P51956 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms