Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5□□□□□ -1.61
CLCNKAP51800 DPRXP4-201ENST00000578053 568 ntBASIC5□□□□□ -1.61
CLCNKAP51800 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5□□□□□ -1.61
CLCNKAP51800 CBX3P2-202ENST00000583365 535 ntBASIC5□□□□□ -1.61
CLCNKAP51800 MIR3936-201ENST00000584304 110 ntBASIC5□□□□□ -1.61
CLCNKAP51800 AC005034.4-201ENST00000603612 899 ntBASIC5□□□□□ -1.61
CLCNKAP51800 AC096553.1-201ENST00000605169 829 ntBASIC5□□□□□ -1.61
CLCNKAP51800 EIF3FP1-201ENST00000613970 806 ntBASIC5□□□□□ -1.61
CLCNKAP51800 AC090510.2-201ENST00000617465 629 ntBASIC5□□□□□ -1.61
CLCNKAP51800 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5□□□□□ -1.61
CLCNKAP51800 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5□□□□□ -1.61
CLCNKAP51800 FRG1EP-201ENST00000634469 770 ntBASIC5□□□□□ -1.61
CLCNKAP51800 AC099654.9-201ENST00000637055 678 ntBASIC5□□□□□ -1.61
CLCNKAP51800 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5□□□□□ -1.61
CLCNKAP51800 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CLCNKAP51800 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLCNKAP51800 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLCNKAP51800 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLCNKAP51800 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLCNKAP51800 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLCNKAP51800 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5□□□□□ -1.61
CLCNKAP51800 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CLCNKAP51800 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5□□□□□ -1.61
CLCNKAP51800 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CLCNKAP51800 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLCNKAP51800 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CLCNKAP51800 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLCNKAP51800 AL645568.2-201ENST00000432815 1337 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLCNKAP51800 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CLCNKAP51800 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.99□□□□□ -1.61
CLCNKAP51800 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.99□□□□□ -1.61
CLCNKAP51800 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CLCNKAP51800 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCNKAP51800 RNU4-44P-201ENST00000363050 141 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 BMS1P3-201ENST00000372011 932 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 RNU6-178P-201ENST00000384631 104 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 RNU6-796P-201ENST00000391086 107 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 SNORA68.2-201ENST00000391263 128 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 CTSL3P-202ENST00000412179 788 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 SETP15-201ENST00000412724 337 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 NPM1P40-201ENST00000412758 733 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.99□□□□□ -1.61
CLCNKAP51800 AC016769.2-201ENST00000414815 475 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 GJA6P-201ENST00000415117 1042 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 BX664727.1-201ENST00000416024 466 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCNKAP51800 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCNKAP51800 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.99□□□□□ -1.61
CLCNKAP51800 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCNKAP51800 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCNKAP51800 OR7E125P-201ENST00000443450 846 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 AL606517.1-201ENST00000446914 387 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 AL035551.1-201ENST00000446931 348 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.99□□□□□ -1.61
CLCNKAP51800 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.99□□□□□ -1.61
CLCNKAP51800 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.99□□□□□ -1.61
CLCNKAP51800 RFPL4AP5-201ENST00000514977 504 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCNKAP51800 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCNKAP51800 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.99□□□□□ -1.61
CLCNKAP51800 OR5AZ1P-201ENST00000527448 943 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.99□□□□□ -1.61
CLCNKAP51800 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.99□□□□□ -1.61
CLCNKAP51800 AL158211.1-201ENST00000566763 763 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 AC021483.2-201ENST00000567415 758 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.99□□□□□ -1.61
CLCNKAP51800 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCNKAP51800 AC022884.2-201ENST00000578535 580 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 MTCYBP13-201ENST00000578634 1093 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.99□□□□□ -1.61
CLCNKAP51800 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.99□□□□□ -1.61
CLCNKAP51800 AP001033.2-201ENST00000609701 1003 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.99□□□□□ -1.61
CLCNKAP51800 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.99□□□□□ -1.61
CLCNKAP51800 AC091046.2-201ENST00000620775 665 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 AC091905.4-201ENST00000623432 202 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 AC090506.2-201ENST00000624521 419 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 AC092159.4-201ENST00000624944 550 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.99□□□□□ -1.61
CLCNKAP51800 INTS6P1-201ENST00000504674 2530 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CLCNKAP51800 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.99□□□□□ -1.61
CLCNKAP51800 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.99□□□□□ -1.61
CLCNKAP51800 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
CLCNKAP51800 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
CLCNKAP51800 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLCNKAP51800 ZNF90P1-201ENST00000480493 1951 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.98□□□□□ -1.61
CLCNKAP51800 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLCNKAP51800 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.98□□□□□ -1.61
CLCNKAP51800 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.98□□□□□ -1.61
CLCNKAP51800 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.98□□□□□ -1.61
CLCNKAP51800 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.98□□□□□ -1.61
CLCNKAP51800 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
CLCNKAP51800 ADAM5-202ENST00000399789 1942 ntBASIC4.98□□□□□ -1.61
CLCNKAP51800 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CLCNKAP51800 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLCNKAP51800 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms