Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 HMGB1P1-201ENST00000522557 636 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 OR7E13P-201ENST00000526052 910 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX2-1P43699 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NKX2-1P43699 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX2-1P43699 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
NKX2-1P43699 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NKX2-1P43699 DPPA2P4-201ENST00000563717 878 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 RN7SL708P-201ENST00000580952 299 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.29□□□□□ -1.72
NKX2-1P43699 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX2-1P43699 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX2-1P43699 RN7SL544P-201ENST00000617232 284 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.29□□□□□ -1.72
NKX2-1P43699 RN7SL763P-201ENST00000620922 284 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 AC016717.3-201ENST00000624730 554 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.29□□□□□ -1.72
NKX2-1P43699 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.29□□□□□ -1.72
NKX2-1P43699 AC129915.3-201ENST00000634128 948 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 AC087565.3-203ENST00000641018 837 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 SMG1P6-201ENST00000532337 2930 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 AC006210.2-201ENST00000367074 1545 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.29□□□□□ -1.72
NKX2-1P43699 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
NKX2-1P43699 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NKX2-1P43699 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX2-1P43699 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.29□□□□□ -1.72
NKX2-1P43699 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
NKX2-1P43699 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NKX2-1P43699 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
NKX2-1P43699 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX2-1P43699 AC139713.2-215ENST00000641428 5037 ntBASIC4.29□□□□□ -1.72
NKX2-1P43699 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.29□□□□□ -1.72
NKX2-1P43699 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.29□□□□□ -1.72
NKX2-1P43699 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-1P43699 BTBD10P1-201ENST00000549824 1352 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
NKX2-1P43699 AC107068.1-201ENST00000563286 4218 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-1P43699 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX2-1P43699 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
NKX2-1P43699 TMSB4XP2-201ENST00000335179 210 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NKX2-1P43699 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-1P43699 RN7SKP275-201ENST00000364626 301 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-1P43699 RNU6-298P-201ENST00000390888 96 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 AC093719.1-202ENST00000392735 373 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 AC013442.1-201ENST00000397347 228 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 OR7E101P-201ENST00000400428 513 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 AL359643.1-201ENST00000404109 423 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 ZNF602P-201ENST00000405929 924 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 GAPDHP42-201ENST00000406848 981 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 MIR1203-201ENST00000408812 85 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 LIPT1P1-201ENST00000415870 1186 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 RPL36AP10-201ENST00000421785 322 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX2-1P43699 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.28□□□□□ -1.72
NKX2-1P43699 NAP1L4P2-201ENST00000425958 899 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 AP001324.1-201ENST00000428553 399 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 AC073069.1-201ENST00000428657 441 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX2-1P43699 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX2-1P43699 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX2-1P43699 AL031584.1-201ENST00000447169 754 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 SEPT14P24-201ENST00000447236 180 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.28□□□□□ -1.72
NKX2-1P43699 DUXAP8-207ENST00000456786 622 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.28□□□□□ -1.72
NKX2-1P43699 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX2-1P43699 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX2-1P43699 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-1P43699 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.28□□□□□ -1.72
NKX2-1P43699 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX2-1P43699 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.28□□□□□ -1.72
NKX2-1P43699 AC005341.1-201ENST00000571086 708 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.28□□□□□ -1.72
NKX2-1P43699 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX2-1P43699 TAS2R6P-201ENST00000605022 826 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 AC093673.2-201ENST00000609674 331 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 AC063944.3-201ENST00000609969 533 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 DUXAP10-204ENST00000612052 616 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 AC022106.2-201ENST00000620114 757 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX2-1P43699 AC015871.5-202ENST00000623252 701 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 AL590396.4-201ENST00000636779 956 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
NKX2-1P43699 LINC01808-202ENST00000641680 1116 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-1P43699 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-1P43699 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-1P43699 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
NKX2-1P43699 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
NKX2-1P43699 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.28□□□□□ -1.72
NKX2-1P43699 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-1P43699 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-1P43699 MAPK10-349ENST00000641767 3661 ntBASIC4.28□□□□□ -1.72
NKX2-1P43699 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms