Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC006484.1-201ENST00000435086 1884 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 AL353796.1-201ENST00000561542 3241 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 WDR95P-201ENST00000425638 1542 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 MRE11P1-201ENST00000464884 2127 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 AL031985.3-201ENST00000565390 2449 ntBASIC5.83□□□□□ -1.48
HOXC12P31275 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
HOXC12P31275 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC12P31275 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC12P31275 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC12P31275 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC12P31275 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC12P31275 AC005332.9-201ENST00000620266 2921 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC12P31275 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXC12P31275 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
HOXC12P31275 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC12P31275 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC12P31275 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC12P31275 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC12P31275 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
HOXC12P31275 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HOXC12P31275 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HOXC12P31275 RNU6-216P-201ENST00000363282 104 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 RNU6-1151P-201ENST00000384684 107 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 U3.23-201ENST00000391132 200 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.82□□□□□ -1.48
HOXC12P31275 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HOXC12P31275 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC12P31275 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXC12P31275 AC234782.4-201ENST00000417646 1048 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 AC048351.1-201ENST00000420064 602 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 AC104843.2-201ENST00000427666 297 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXC12P31275 NEK4P1-201ENST00000433383 879 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXC12P31275 RAB11AP1-201ENST00000442978 646 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXC12P31275 AL035551.1-201ENST00000446931 348 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 NANOGNBP1-201ENST00000448444 480 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 HMGB1P4-201ENST00000455362 567 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 AP000797.1-201ENST00000478870 387 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 RN7SL413P-201ENST00000482700 297 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
HOXC12P31275 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC12P31275 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.82□□□□□ -1.48
HOXC12P31275 AC027309.2-201ENST00000520566 192 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC12P31275 AF279873.1-201ENST00000523393 313 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXC12P31275 OR4A45P-201ENST00000529954 901 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC12P31275 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXC12P31275 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HOXC12P31275 EEF1B2P4-201ENST00000551398 348 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC12P31275 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXC12P31275 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXC12P31275 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC12P31275 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.82□□□□□ -1.48
HOXC12P31275 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXC12P31275 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
HOXC12P31275 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXC12P31275 AC109347.2-201ENST00000610220 349 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 AL135999.3-201ENST00000610501 812 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC12P31275 AC008115.3-201ENST00000614874 549 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 uc_338.31-201ENST00000615595 186 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 AC231657.1-201ENST00000624313 397 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 AC019226.1-201ENST00000625666 515 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC12P31275 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC12P31275 OR11H2-202ENST00000641517 1085 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC12P31275 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HOXC12P31275 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC12P31275 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
HOXC12P31275 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC12P31275 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC12P31275 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXC12P31275 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC12P31275 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC12P31275 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC12P31275 AC007159.1-201ENST00000566529 4706 ntBASIC5.82□□□□□ -1.48
HOXC12P31275 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
HOXC12P31275 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HOXC12P31275 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HOXC12P31275 AC093775.1-201ENST00000624154 1868 ntBASIC5.81□□□□□ -1.48
HOXC12P31275 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HOXC12P31275 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HOXC12P31275 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HOXC12P31275 AF287957.1-201ENST00000607368 1595 ntBASIC5.81□□□□□ -1.48
HOXC12P31275 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXC12P31275 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXC12P31275 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HOXC12P31275 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HOXC12P31275 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms