Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RPL7P33-201ENST00000444159 742 ntBASIC5.06□□□□□ -1.6
TPM1P09493 VN1R96P-201ENST00000446052 858 ntBASIC5.06□□□□□ -1.6
TPM1P09493 AC099063.2-201ENST00000446360 662 ntBASIC5.06□□□□□ -1.6
TPM1P09493 RPS5P7-201ENST00000456664 608 ntBASIC5.06□□□□□ -1.6
TPM1P09493 AC114982.2-201ENST00000461396 358 ntBASIC5.06□□□□□ -1.6
TPM1P09493 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.06□□□□□ -1.6
TPM1P09493 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.06□□□□□ -1.6
TPM1P09493 AC090114.3-201ENST00000479267 829 ntBASIC5.06□□□□□ -1.6
TPM1P09493 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.06□□□□□ -1.6
TPM1P09493 UBA52P3-201ENST00000491303 382 ntBASIC5.06□□□□□ -1.6
TPM1P09493 AC008897.1-201ENST00000494006 347 ntBASIC5.06□□□□□ -1.6
TPM1P09493 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TPM1P09493 AC091868.1-201ENST00000508746 304 ntBASIC5.06□□□□□ -1.6
TPM1P09493 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.06□□□□□ -1.6
TPM1P09493 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.06□□□□□ -1.6
TPM1P09493 RNA5SP446-201ENST00000515955 82 ntBASIC5.06□□□□□ -1.6
TPM1P09493 RN7SKP66-201ENST00000516681 231 ntBASIC5.06□□□□□ -1.6
TPM1P09493 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.06□□□□□ -1.6
TPM1P09493 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TPM1P09493 AC025423.2-201ENST00000537570 439 ntBASIC5.06□□□□□ -1.6
TPM1P09493 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TPM1P09493 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TPM1P09493 OR11J2P-201ENST00000555298 907 ntBASIC5.06□□□□□ -1.6
TPM1P09493 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.06□□□□□ -1.6
TPM1P09493 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.06□□□□□ -1.6
TPM1P09493 AL161912.3-201ENST00000605404 628 ntBASIC5.06□□□□□ -1.6
TPM1P09493 AC009163.6-201ENST00000612367 342 ntBASIC5.06□□□□□ -1.6
TPM1P09493 AL353726.1-201ENST00000614041 1000 ntBASIC5.06□□□□□ -1.6
TPM1P09493 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
TPM1P09493 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TPM1P09493 AL442639.1-201ENST00000625030 1899 ntBASIC5.06□□□□□ -1.6
TPM1P09493 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.06□□□□□ -1.6
TPM1P09493 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TPM1P09493 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TPM1P09493 NCLP2-201ENST00000416078 1462 ntBASIC5.06□□□□□ -1.6
TPM1P09493 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TPM1P09493 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TPM1P09493 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
TPM1P09493 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TPM1P09493 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TPM1P09493 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
TPM1P09493 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TPM1P09493 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TPM1P09493 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.05□□□□□ -1.6
TPM1P09493 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TPM1P09493 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
TPM1P09493 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.05□□□□□ -1.6
TPM1P09493 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.05□□□□□ -1.6
TPM1P09493 MAPRE1P3-201ENST00000435438 796 ntBASIC5.05□□□□□ -1.6
TPM1P09493 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.05□□□□□ -1.6
TPM1P09493 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.05□□□□□ -1.6
TPM1P09493 SETP20-201ENST00000457046 852 ntBASIC5.05□□□□□ -1.6
TPM1P09493 SEPT14P1-201ENST00000458703 648 ntBASIC5.05□□□□□ -1.6
TPM1P09493 AC093270.2-201ENST00000486157 792 ntBASIC5.05□□□□□ -1.6
TPM1P09493 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TPM1P09493 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.05□□□□□ -1.6
TPM1P09493 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.05□□□□□ -1.6
TPM1P09493 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.05□□□□□ -1.6
TPM1P09493 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TPM1P09493 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.05□□□□□ -1.6
TPM1P09493 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TPM1P09493 MTND2P13-201ENST00000577438 1039 ntBASIC5.05□□□□□ -1.6
TPM1P09493 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.05□□□□□ -1.6
TPM1P09493 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
TPM1P09493 AL121873.1-201ENST00000616013 524 ntBASIC5.05□□□□□ -1.6
TPM1P09493 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TPM1P09493 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC5.05□□□□□ -1.6
TPM1P09493 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TPM1P09493 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.05□□□□□ -1.6
TPM1P09493 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
TPM1P09493 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.05□□□□□ -1.6
TPM1P09493 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TPM1P09493 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.04□□□□□ -1.6
TPM1P09493 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TPM1P09493 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TPM1P09493 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
TPM1P09493 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TPM1P09493 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
TPM1P09493 RNA5SP22-201ENST00000365393 109 ntBASIC5.04□□□□□ -1.6
TPM1P09493 RNU1-44P-201ENST00000384453 163 ntBASIC5.04□□□□□ -1.6
TPM1P09493 U3.25-201ENST00000391209 220 ntBASIC5.04□□□□□ -1.6
TPM1P09493 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.04□□□□□ -1.6
TPM1P09493 AL645608.4-201ENST00000423619 154 ntBASIC5.04□□□□□ -1.6
TPM1P09493 IPMKP1-201ENST00000425988 855 ntBASIC5.04□□□□□ -1.6
TPM1P09493 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.04□□□□□ -1.6
TPM1P09493 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.04□□□□□ -1.6
TPM1P09493 GEMIN8P3-201ENST00000445417 720 ntBASIC5.04□□□□□ -1.6
TPM1P09493 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.04□□□□□ -1.6
TPM1P09493 RPS27AP15-201ENST00000447672 466 ntBASIC5.04□□□□□ -1.6
TPM1P09493 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.04□□□□□ -1.6
TPM1P09493 SCARNA10-201ENST00000459255 330 ntBASIC5.04□□□□□ -1.6
TPM1P09493 RPS26P39-201ENST00000469206 341 ntBASIC5.04□□□□□ -1.6
TPM1P09493 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.04□□□□□ -1.6
TPM1P09493 RPL7P51-201ENST00000490532 749 ntBASIC5.04□□□□□ -1.6
TPM1P09493 HIGD1AP14-201ENST00000507617 282 ntBASIC5.04□□□□□ -1.6
TPM1P09493 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.04□□□□□ -1.6
TPM1P09493 IGLV3-26-201ENST00000520756 302 ntBASIC5.04□□□□□ -1.6
TPM1P09493 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.04□□□□□ -1.6
TPM1P09493 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.04□□□□□ -1.6
TPM1P09493 AL139395.1-201ENST00000603662 160 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms