Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AL360012.1-201ENST00000602813 131 ntBASIC5.81□□□□□ -1.48
COL5A2P05997 AC024220.1-201ENST00000603675 484 ntBASIC5.81□□□□□ -1.48
COL5A2P05997 AC067931.1-201ENST00000624190 671 ntBASIC5.81□□□□□ -1.48
COL5A2P05997 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL5A2P05997 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
COL5A2P05997 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL5A2P05997 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.81□□□□□ -1.48
COL5A2P05997 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.81□□□□□ -1.48
COL5A2P05997 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL5A2P05997 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.8□□□□□ -1.48
COL5A2P05997 TTC41P-205ENST00000551270 3963 ntBASIC5.8□□□□□ -1.48
COL5A2P05997 NOL8P1-201ENST00000508336 3529 ntBASIC5.8□□□□□ -1.48
COL5A2P05997 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL5A2P05997 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
COL5A2P05997 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL5A2P05997 AL133243.3-201ENST00000617415 3004 ntBASIC5.8□□□□□ -1.48
COL5A2P05997 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.8□□□□□ -1.48
COL5A2P05997 RPS3AP25-201ENST00000411660 793 ntBASIC5.8□□□□□ -1.48
COL5A2P05997 RPL7P2-201ENST00000427639 268 ntBASIC5.8□□□□□ -1.48
COL5A2P05997 HMGB3P5-201ENST00000428894 612 ntBASIC5.8□□□□□ -1.48
COL5A2P05997 AC007389.2-201ENST00000434630 306 ntBASIC5.8□□□□□ -1.48
COL5A2P05997 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.8□□□□□ -1.48
COL5A2P05997 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.8□□□□□ -1.48
COL5A2P05997 AC099522.1-202ENST00000514718 367 ntBASIC5.8□□□□□ -1.48
COL5A2P05997 RNA5SP116-201ENST00000516132 98 ntBASIC5.8□□□□□ -1.48
COL5A2P05997 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.8□□□□□ -1.48
COL5A2P05997 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.8□□□□□ -1.48
COL5A2P05997 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
COL5A2P05997 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
COL5A2P05997 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
COL5A2P05997 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
COL5A2P05997 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL5A2P05997 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.8□□□□□ -1.48
COL5A2P05997 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.8□□□□□ -1.48
COL5A2P05997 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
COL5A2P05997 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
COL5A2P05997 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL5A2P05997 CASC19-206ENST00000641028 1430 ntBASIC5.79□□□□□ -1.48
COL5A2P05997 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL5A2P05997 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL5A2P05997 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
COL5A2P05997 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
COL5A2P05997 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL5A2P05997 AL672167.2-201ENST00000377164 879 ntBASIC5.79□□□□□ -1.48
COL5A2P05997 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
COL5A2P05997 RPL7P58-201ENST00000402913 758 ntBASIC5.79□□□□□ -1.48
COL5A2P05997 RNU6ATAC-201ENST00000408749 126 ntBASIC5.79□□□□□ -1.48
COL5A2P05997 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.79□□□□□ -1.48
COL5A2P05997 Z74021.1-201ENST00000423610 407 ntBASIC5.79□□□□□ -1.48
COL5A2P05997 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.79□□□□□ -1.48
COL5A2P05997 UBE2V1P3-201ENST00000439651 417 ntBASIC5.79□□□□□ -1.48
COL5A2P05997 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.79□□□□□ -1.48
COL5A2P05997 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.79□□□□□ -1.48
COL5A2P05997 AL133547.1-201ENST00000448546 220 ntBASIC5.79□□□□□ -1.48
COL5A2P05997 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL5A2P05997 AC090686.1-201ENST00000481577 749 ntBASIC5.79□□□□□ -1.48
COL5A2P05997 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.79□□□□□ -1.48
COL5A2P05997 DYNLL1P4-201ENST00000549314 266 ntBASIC5.79□□□□□ -1.48
COL5A2P05997 AC130352.1-201ENST00000602979 661 ntBASIC5.79□□□□□ -1.48
COL5A2P05997 AC025175.1-201ENST00000606482 759 ntBASIC5.79□□□□□ -1.48
COL5A2P05997 AC106871.1-201ENST00000568324 3102 ntBASIC5.79□□□□□ -1.48
COL5A2P05997 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL5A2P05997 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL5A2P05997 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL5A2P05997 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.79□□□□□ -1.48
COL5A2P05997 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL5A2P05997 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.79□□□□□ -1.48
COL5A2P05997 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL5A2P05997 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
COL5A2P05997 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL5A2P05997 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
COL5A2P05997 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
COL5A2P05997 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.79□□□□□ -1.48
COL5A2P05997 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
COL5A2P05997 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL5A2P05997 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL5A2P05997 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.78□□□□□ -1.48
COL5A2P05997 ADAM24P-201ENST00000398655 2101 ntBASIC5.78□□□□□ -1.48
COL5A2P05997 RNA5SP36-201ENST00000410197 133 ntBASIC5.78□□□□□ -1.48
COL5A2P05997 RPL37P1-201ENST00000432310 284 ntBASIC5.78□□□□□ -1.48
COL5A2P05997 RPL6P5-201ENST00000445678 828 ntBASIC5.78□□□□□ -1.48
COL5A2P05997 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.78□□□□□ -1.48
COL5A2P05997 NPM1P21-201ENST00000513394 762 ntBASIC5.78□□□□□ -1.48
COL5A2P05997 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.78□□□□□ -1.48
COL5A2P05997 OR5BC1P-201ENST00000529327 739 ntBASIC5.78□□□□□ -1.48
COL5A2P05997 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.78□□□□□ -1.48
COL5A2P05997 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.78□□□□□ -1.48
COL5A2P05997 AL451086.1-201ENST00000605596 223 ntBASIC5.78□□□□□ -1.48
COL5A2P05997 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.78□□□□□ -1.48
COL5A2P05997 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.78□□□□□ -1.48
COL5A2P05997 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.78□□□□□ -1.48
COL5A2P05997 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL5A2P05997 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL5A2P05997 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
COL5A2P05997 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL5A2P05997 AL355852.1-201ENST00000454081 1771 ntBASIC5.78□□□□□ -1.48
COL5A2P05997 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
COL5A2P05997 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.78□□□□□ -1.48
COL5A2P05997 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL5A2P05997 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms