Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.95□□□□□ -1.62
LDLRP01130 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.95□□□□□ -1.62
LDLRP01130 BTF3P6-201ENST00000448054 499 ntBASIC4.95□□□□□ -1.62
LDLRP01130 AC069277.2-201ENST00000454211 432 ntBASIC4.95□□□□□ -1.62
LDLRP01130 RPS29P33-201ENST00000456717 146 ntBASIC4.95□□□□□ -1.62
LDLRP01130 HSPE1P22-201ENST00000456856 327 ntBASIC4.95□□□□□ -1.62
LDLRP01130 RPS3AP41-201ENST00000462701 778 ntBASIC4.95□□□□□ -1.62
LDLRP01130 RN7SL738P-201ENST00000470264 297 ntBASIC4.95□□□□□ -1.62
LDLRP01130 AC105233.1-201ENST00000498840 781 ntBASIC4.95□□□□□ -1.62
LDLRP01130 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LDLRP01130 BTG4P1-201ENST00000510421 183 ntBASIC4.95□□□□□ -1.62
LDLRP01130 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.95□□□□□ -1.62
LDLRP01130 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.95□□□□□ -1.62
LDLRP01130 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.95□□□□□ -1.62
LDLRP01130 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
LDLRP01130 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.95□□□□□ -1.62
LDLRP01130 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LDLRP01130 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.95□□□□□ -1.62
LDLRP01130 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LDLRP01130 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.95□□□□□ -1.62
LDLRP01130 AC018695.5-201ENST00000605872 315 ntBASIC4.95□□□□□ -1.62
LDLRP01130 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LDLRP01130 AC004241.3-201ENST00000611728 517 ntBASIC4.95□□□□□ -1.62
LDLRP01130 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LDLRP01130 AC022306.3-201ENST00000619930 550 ntBASIC4.95□□□□□ -1.62
LDLRP01130 AC009269.6-201ENST00000621778 588 ntBASIC4.95□□□□□ -1.62
LDLRP01130 AL353662.3-201ENST00000625131 237 ntBASIC4.95□□□□□ -1.62
LDLRP01130 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.95□□□□□ -1.62
LDLRP01130 AP000542.2-201ENST00000623199 6179 ntBASIC4.95□□□□□ -1.62
LDLRP01130 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.95□□□□□ -1.62
LDLRP01130 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.95□□□□□ -1.62
LDLRP01130 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LDLRP01130 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LDLRP01130 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.95□□□□□ -1.62
LDLRP01130 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LDLRP01130 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
LDLRP01130 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LDLRP01130 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LDLRP01130 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LDLRP01130 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.95□□□□□ -1.62
LDLRP01130 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LDLRP01130 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.95□□□□□ -1.62
LDLRP01130 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
LDLRP01130 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.94□□□□□ -1.62
LDLRP01130 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LDLRP01130 BTBD10P1-201ENST00000549824 1352 ntBASIC4.94□□□□□ -1.62
LDLRP01130 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LDLRP01130 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LDLRP01130 AC006210.2-201ENST00000367074 1545 ntBASIC4.94□□□□□ -1.62
LDLRP01130 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.94□□□□□ -1.62
LDLRP01130 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LDLRP01130 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.94□□□□□ -1.62
LDLRP01130 RNU6-609P-201ENST00000365459 107 ntBASIC4.94□□□□□ -1.62
LDLRP01130 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
LDLRP01130 UBBP2-201ENST00000376781 231 ntBASIC4.94□□□□□ -1.62
LDLRP01130 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.94□□□□□ -1.62
LDLRP01130 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.94□□□□□ -1.62
LDLRP01130 OR6C64P-201ENST00000419708 825 ntBASIC4.94□□□□□ -1.62
LDLRP01130 AC092570.3-201ENST00000420113 693 ntBASIC4.94□□□□□ -1.62
LDLRP01130 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.94□□□□□ -1.62
LDLRP01130 AC104837.2-201ENST00000427236 424 ntBASIC4.94□□□□□ -1.62
LDLRP01130 NDUFA5P10-201ENST00000432147 357 ntBASIC4.94□□□□□ -1.62
LDLRP01130 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.94□□□□□ -1.62
LDLRP01130 AC093716.1-201ENST00000435923 377 ntBASIC4.94□□□□□ -1.62
LDLRP01130 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.94□□□□□ -1.62
LDLRP01130 MRPL35P2-201ENST00000448009 511 ntBASIC4.94□□□□□ -1.62
LDLRP01130 AL591473.1-201ENST00000464297 313 ntBASIC4.94□□□□□ -1.62
LDLRP01130 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.94□□□□□ -1.62
LDLRP01130 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.94□□□□□ -1.62
LDLRP01130 AC110760.3-202ENST00000515177 371 ntBASIC4.94□□□□□ -1.62
LDLRP01130 RNA5SP303-201ENST00000516192 130 ntBASIC4.94□□□□□ -1.62
LDLRP01130 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.94□□□□□ -1.62
LDLRP01130 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.94□□□□□ -1.62
LDLRP01130 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LDLRP01130 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.94□□□□□ -1.62
LDLRP01130 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LDLRP01130 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.94□□□□□ -1.62
LDLRP01130 AC074050.1-201ENST00000563247 211 ntBASIC4.94□□□□□ -1.62
LDLRP01130 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.94□□□□□ -1.62
LDLRP01130 CD24P2-201ENST00000565486 219 ntBASIC4.94□□□□□ -1.62
LDLRP01130 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.94□□□□□ -1.62
LDLRP01130 BNIP3P40-201ENST00000596017 556 ntBASIC4.94□□□□□ -1.62
LDLRP01130 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.94□□□□□ -1.62
LDLRP01130 AL137072.1-201ENST00000603444 466 ntBASIC4.94□□□□□ -1.62
LDLRP01130 AL357094.1-201ENST00000603845 844 ntBASIC4.94□□□□□ -1.62
LDLRP01130 BNIP3P31-201ENST00000604515 566 ntBASIC4.94□□□□□ -1.62
LDLRP01130 AC005084.1-201ENST00000605160 304 ntBASIC4.94□□□□□ -1.62
LDLRP01130 AC096553.1-201ENST00000605169 829 ntBASIC4.94□□□□□ -1.62
LDLRP01130 AC019131.2-201ENST00000609071 870 ntBASIC4.94□□□□□ -1.62
LDLRP01130 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.94□□□□□ -1.62
LDLRP01130 AC015871.5-202ENST00000623252 701 ntBASIC4.94□□□□□ -1.62
LDLRP01130 AC090617.9-201ENST00000623751 147 ntBASIC4.94□□□□□ -1.62
LDLRP01130 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LDLRP01130 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LDLRP01130 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LDLRP01130 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
LDLRP01130 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LDLRP01130 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LDLRP01130 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LDLRP01130 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms