Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.79□□□□□ -1.64
NKX2-2O95096 AC139713.2-210ENST00000641741 992 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NKX2-2O95096 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NKX2-2O95096 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-2O95096 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
NKX2-2O95096 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-2O95096 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-2O95096 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-2O95096 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NKX2-2O95096 NSRP1P1-201ENST00000444067 1693 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
NKX2-2O95096 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-2O95096 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
NKX2-2O95096 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
NKX2-2O95096 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.79□□□□□ -1.64
NKX2-2O95096 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-2O95096 CASC19-221ENST00000641309 1382 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.78□□□□□ -1.64
NKX2-2O95096 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
NKX2-2O95096 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-2O95096 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-2O95096 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-2O95096 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-2O95096 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-2O95096 SNORA17.1-201ENST00000362945 126 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 RNU1-43P-201ENST00000365052 165 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-2O95096 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-2O95096 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX2-2O95096 AC092638.1-201ENST00000411966 1275 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX2-2O95096 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX2-2O95096 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX2-2O95096 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 CDY14P-201ENST00000431260 1014 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX2-2O95096 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX2-2O95096 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX2-2O95096 CDY12P-201ENST00000440679 1015 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX2-2O95096 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX2-2O95096 CDY13P-201ENST00000445813 1015 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-2O95096 CDY23P-201ENST00000451661 1014 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 RPL10P17-201ENST00000453852 316 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 TRBV8-2-201ENST00000475637 270 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX2-2O95096 AC096571.1-202ENST00000506634 735 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 HPRT1P1-201ENST00000509498 657 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 AC104108.1-201ENST00000509930 412 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 AC026782.2-201ENST00000510845 636 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX2-2O95096 PRELID3BP4-201ENST00000515476 571 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 RNU6-276P-201ENST00000516114 96 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 RNA5SP303-201ENST00000516192 130 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX2-2O95096 AP001207.2-201ENST00000519490 539 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.78□□□□□ -1.64
NKX2-2O95096 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.78□□□□□ -1.64
NKX2-2O95096 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX2-2O95096 AP001372.4-201ENST00000524889 472 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 OR8I1P-201ENST00000529291 931 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 AC006518.2-201ENST00000542513 940 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX2-2O95096 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.78□□□□□ -1.64
NKX2-2O95096 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX2-2O95096 AC006349.1-201ENST00000555526 235 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.78□□□□□ -1.64
NKX2-2O95096 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX2-2O95096 ZNF971P-201ENST00000562068 1249 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 AC127024.5-201ENST00000580085 462 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX2-2O95096 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX2-2O95096 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX2-2O95096 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX2-2O95096 EIF1P6-201ENST00000600054 334 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX2-2O95096 AC034229.4-201ENST00000607861 441 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX2-2O95096 AC022467.1-201ENST00000614738 749 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 AC008115.4-201ENST00000619780 775 ntBASIC4.78□□□□□ -1.64
NKX2-2O95096 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX2-2O95096 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
NKX2-2O95096 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-2O95096 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NKX2-2O95096 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.78□□□□□ -1.64
NKX2-2O95096 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NKX2-2O95096 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX2-2O95096 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.78□□□□□ -1.64
NKX2-2O95096 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX2-2O95096 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX2-2O95096 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.77□□□□□ -1.65
NKX2-2O95096 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-2O95096 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-2O95096 AC011755.1-201ENST00000623763 2049 ntBASIC4.77□□□□□ -1.65
NKX2-2O95096 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-2O95096 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
NKX2-2O95096 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NKX2-2O95096 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms