Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.71□□□□□ -1.66
SSX4O60224 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SSX4O60224 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSX4O60224 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSX4O60224 AC005294.1-201ENST00000355509 281 ntBASIC4.71□□□□□ -1.66
SSX4O60224 BMS1P3-201ENST00000372011 932 ntBASIC4.71□□□□□ -1.66
SSX4O60224 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.71□□□□□ -1.66
SSX4O60224 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.71□□□□□ -1.66
SSX4O60224 CASP3P1-201ENST00000446037 609 ntBASIC4.71□□□□□ -1.66
SSX4O60224 FAR2P1-206ENST00000449736 709 ntBASIC4.71□□□□□ -1.66
SSX4O60224 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.71□□□□□ -1.66
SSX4O60224 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.71□□□□□ -1.66
SSX4O60224 AL645937.3-201ENST00000453647 936 ntBASIC4.71□□□□□ -1.66
SSX4O60224 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SSX4O60224 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.71□□□□□ -1.66
SSX4O60224 AL591473.1-201ENST00000464297 313 ntBASIC4.71□□□□□ -1.66
SSX4O60224 RPSAP50-201ENST00000481955 852 ntBASIC4.71□□□□□ -1.66
SSX4O60224 RPS12P31-201ENST00000491419 398 ntBASIC4.71□□□□□ -1.66
SSX4O60224 AC119751.4-201ENST00000507498 357 ntBASIC4.71□□□□□ -1.66
SSX4O60224 HMGB3P16-201ENST00000508037 287 ntBASIC4.71□□□□□ -1.66
SSX4O60224 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.71□□□□□ -1.66
SSX4O60224 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.71□□□□□ -1.66
SSX4O60224 OR5AK3P-201ENST00000527486 1297 ntBASIC4.71□□□□□ -1.66
SSX4O60224 PMS2P3-207ENST00000529061 717 ntBASIC4.71□□□□□ -1.66
SSX4O60224 AP003066.2-201ENST00000529375 555 ntBASIC4.71□□□□□ -1.66
SSX4O60224 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.71□□□□□ -1.66
SSX4O60224 HMGN2P6-201ENST00000551091 273 ntBASIC4.71□□□□□ -1.66
SSX4O60224 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.71□□□□□ -1.66
SSX4O60224 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.71□□□□□ -1.66
SSX4O60224 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.71□□□□□ -1.66
SSX4O60224 OR1AB1P-201ENST00000585564 761 ntBASIC4.71□□□□□ -1.66
SSX4O60224 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.71□□□□□ -1.66
SSX4O60224 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.71□□□□□ -1.66
SSX4O60224 AC011458.1-201ENST00000604034 617 ntBASIC4.71□□□□□ -1.66
SSX4O60224 AC097504.2-201ENST00000608088 454 ntBASIC4.71□□□□□ -1.66
SSX4O60224 AC000068.2-201ENST00000608816 460 ntBASIC4.71□□□□□ -1.66
SSX4O60224 AL136295.6-201ENST00000610486 658 ntBASIC4.71□□□□□ -1.66
SSX4O60224 AP003476.1-201ENST00000623984 516 ntBASIC4.71□□□□□ -1.66
SSX4O60224 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.71□□□□□ -1.66
SSX4O60224 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.71□□□□□ -1.66
SSX4O60224 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SSX4O60224 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.71□□□□□ -1.66
SSX4O60224 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSX4O60224 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.71□□□□□ -1.66
SSX4O60224 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSX4O60224 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSX4O60224 VN2R3P-201ENST00000422626 1412 ntBASIC4.71□□□□□ -1.66
SSX4O60224 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSX4O60224 AC093775.1-201ENST00000624154 1868 ntBASIC4.71□□□□□ -1.66
SSX4O60224 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
SSX4O60224 SALL4P2-201ENST00000423288 2910 ntBASIC4.7□□□□□ -1.66
SSX4O60224 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
SSX4O60224 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 AL672167.1-205ENST00000641112 3080 ntBASIC4.7□□□□□ -1.66
SSX4O60224 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
SSX4O60224 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.7□□□□□ -1.66
SSX4O60224 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SSX4O60224 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
SSX4O60224 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 RPL23P2-201ENST00000320371 421 ntBASIC4.7□□□□□ -1.66
SSX4O60224 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.7□□□□□ -1.66
SSX4O60224 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 RNU6-1000P-201ENST00000391066 106 ntBASIC4.7□□□□□ -1.66
SSX4O60224 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 AL645927.1-201ENST00000396783 406 ntBASIC4.7□□□□□ -1.66
SSX4O60224 AP002784.2-201ENST00000397300 549 ntBASIC4.7□□□□□ -1.66
SSX4O60224 HMGB3P19-201ENST00000403971 560 ntBASIC4.7□□□□□ -1.66
SSX4O60224 AL390774.1-201ENST00000411924 246 ntBASIC4.7□□□□□ -1.66
SSX4O60224 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.7□□□□□ -1.66
SSX4O60224 RPL23AP27-201ENST00000415161 451 ntBASIC4.7□□□□□ -1.66
SSX4O60224 LINC01881-201ENST00000416103 412 ntBASIC4.7□□□□□ -1.66
SSX4O60224 MTND2P9-201ENST00000422293 931 ntBASIC4.7□□□□□ -1.66
SSX4O60224 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.7□□□□□ -1.66
SSX4O60224 ETF1P3-201ENST00000430422 1160 ntBASIC4.7□□□□□ -1.66
SSX4O60224 FAM96AP1-201ENST00000430879 482 ntBASIC4.7□□□□□ -1.66
SSX4O60224 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.7□□□□□ -1.66
SSX4O60224 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.7□□□□□ -1.66
SSX4O60224 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.7□□□□□ -1.66
SSX4O60224 OR6D1P-201ENST00000436165 939 ntBASIC4.7□□□□□ -1.66
SSX4O60224 AL353093.1-201ENST00000441292 436 ntBASIC4.7□□□□□ -1.66
SSX4O60224 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 RN7SL329P-201ENST00000467740 299 ntBASIC4.7□□□□□ -1.66
SSX4O60224 RPL21P18-201ENST00000469899 480 ntBASIC4.7□□□□□ -1.66
SSX4O60224 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.7□□□□□ -1.66
SSX4O60224 AC004453.1-201ENST00000487895 408 ntBASIC4.7□□□□□ -1.66
SSX4O60224 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSX4O60224 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.7□□□□□ -1.66
SSX4O60224 RN7SL447P-201ENST00000494711 245 ntBASIC4.7□□□□□ -1.66
SSX4O60224 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.7□□□□□ -1.66
SSX4O60224 AC010476.1-201ENST00000519111 851 ntBASIC4.7□□□□□ -1.66
SSX4O60224 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.7□□□□□ -1.66
SSX4O60224 IGKV2D-10-201ENST00000520194 281 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms