Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
ATG4BQ9Y4P1 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 AC053481.2-202ENST00000582394 1500 ntBASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 AC233289.1-201ENST00000403700 508 ntBASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 AC093414.1-201ENST00000434712 514 ntBASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 GTF3AP5-201ENST00000442645 697 ntBASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 SUMO2P1-206ENST00000445436 284 ntBASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 RPL35AP28-201ENST00000459730 331 ntBASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 AC093890.1-201ENST00000502554 540 ntBASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 GCSHP4-201ENST00000538792 439 ntBASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 AC008033.2-201ENST00000542626 177 ntBASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 AC011453.2-201ENST00000603737 729 ntBASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 AP003499.2-201ENST00000624100 483 ntBASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 AC073429.2-201ENST00000569694 1444 ntBASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.62□□□□□ -1.67
ATG4BQ9Y4P1 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 RNU6-31P-201ENST00000384388 108 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 OR2AM1P-201ENST00000422137 422 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 RPL34P6-201ENST00000432390 345 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AC092447.2-201ENST00000435487 669 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 PRPF38AP2-201ENST00000438179 851 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AC112498.1-201ENST00000444401 332 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AC023512.1-201ENST00000444513 499 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AC089999.1-201ENST00000460336 374 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 RPL21P6-201ENST00000479171 504 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AC090543.1-201ENST00000492168 485 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 BTF3P13-201ENST00000513224 490 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 RNA5SP249-201ENST00000516127 99 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 Y_RNA.719-201ENST00000517156 106 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 MORF4L1P3-201ENST00000525966 950 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 PCNPP1-201ENST00000552501 511 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AL049839.1-201ENST00000556151 657 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AL137072.1-201ENST00000603444 466 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AC020910.3-201ENST00000603701 874 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AC005084.1-201ENST00000605160 304 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AC010424.2-201ENST00000607594 443 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AC015914.2-201ENST00000618167 288 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms