Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
ZC3H4Q9UPT8 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AC138915.4-201ENST00000565549 4147 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 RNA5SP273-201ENST00000362484 113 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 Y_RNA.460-201ENST00000384255 102 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 RNU6-1300P-201ENST00000391046 108 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 HMGB1P11-201ENST00000413899 637 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 C1DP2-201ENST00000418167 426 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 TIMM9P3-201ENST00000428659 274 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AL161722.1-201ENST00000446972 1032 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 USP9YP12-201ENST00000450481 570 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 SNX18P26-201ENST00000458433 740 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 RN7SL382P-201ENST00000482631 282 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AC104687.1-201ENST00000485829 412 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 Y_RNA.667-201ENST00000516212 107 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 MTCO2P4-201ENST00000517968 247 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AC106785.4-201ENST00000569492 412 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AC020910.2-201ENST00000603635 610 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AC010200.2-201ENST00000605098 235 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 MIR3662-201ENST00000637030 95 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AC016251.2-201ENST00000623393 3089 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 MAPK10-261ENST00000641050 3109 ntBASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.88□□□□□ -1.15
ZC3H4Q9UPT8 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 RNU6-433P-201ENST00000363216 104 ntBASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 ERMN-204ENST00000409925 556 ntTSL 4 BASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 Y_RNA.598-201ENST00000410480 95 ntBASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 GAPDHP49-201ENST00000421421 961 ntBASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 RPS27AP14-201ENST00000422868 454 ntBASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 AL513185.2-201ENST00000425543 193 ntBASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 NIPA2P1-201ENST00000426223 976 ntBASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 VDAC1P6-201ENST00000430062 855 ntBASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 NDUFA5P4-201ENST00000436704 385 ntBASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 CRYGGP-201ENST00000443337 145 ntBASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 AC135721.2-201ENST00000464237 300 ntBASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 RPS3AP14-201ENST00000483907 780 ntBASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 SCARNA18.1-201ENST00000516330 83 ntBASIC7.87□□□□□ -1.15
ZC3H4Q9UPT8 RN7SKP238-201ENST00000516483 249 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms