Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.92□□□□□ -1.62
SPASTQ9UBP0 AC108120.2-201ENST00000512973 294 ntBASIC4.92□□□□□ -1.62
SPASTQ9UBP0 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SPASTQ9UBP0 GCSHP4-201ENST00000538792 439 ntBASIC4.92□□□□□ -1.62
SPASTQ9UBP0 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.92□□□□□ -1.62
SPASTQ9UBP0 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.92□□□□□ -1.62
SPASTQ9UBP0 UBE2FP2-201ENST00000566646 462 ntBASIC4.92□□□□□ -1.62
SPASTQ9UBP0 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.92□□□□□ -1.62
SPASTQ9UBP0 RN7SL52P-201ENST00000584271 284 ntBASIC4.92□□□□□ -1.62
SPASTQ9UBP0 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.92□□□□□ -1.62
SPASTQ9UBP0 MIMT1-201ENST00000597105 1050 ntBASIC4.92□□□□□ -1.62
SPASTQ9UBP0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.92□□□□□ -1.62
SPASTQ9UBP0 RN7SL722P-201ENST00000617780 284 ntBASIC4.92□□□□□ -1.62
SPASTQ9UBP0 RN7SL565P-201ENST00000618246 284 ntBASIC4.92□□□□□ -1.62
SPASTQ9UBP0 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.92□□□□□ -1.62
SPASTQ9UBP0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SPASTQ9UBP0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SPASTQ9UBP0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SPASTQ9UBP0 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.92□□□□□ -1.62
SPASTQ9UBP0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SPASTQ9UBP0 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SPASTQ9UBP0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SPASTQ9UBP0 HSPD1P11-201ENST00000508643 1702 ntBASIC4.92□□□□□ -1.62
SPASTQ9UBP0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AC099654.2-201ENST00000433031 1980 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 MIR421-201ENST00000365696 85 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 SNORA56-201ENST00000383966 129 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 SNORA77-201ENST00000408716 125 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AC007738.1-201ENST00000413892 348 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 COX6CP13-201ENST00000428703 226 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AC007559.1-201ENST00000428736 355 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 MTCO3P21-201ENST00000430791 643 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 RPL7AP52-201ENST00000458096 790 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 RN7SL738P-201ENST00000470264 297 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 NPM1P29-201ENST00000483112 803 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AC021087.2-201ENST00000504656 1203 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 OR7H2P-201ENST00000513483 306 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 TVP23CP2-201ENST00000571473 623 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AC091042.1-201ENST00000579213 173 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AC005377.1-201ENST00000605126 456 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AC009032.1-201ENST00000617574 431 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AC015813.6-201ENST00000624409 5808 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AL731566.1-201ENST00000620490 1937 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 AL450326.2-201ENST00000421913 1962 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPASTQ9UBP0 A2MP1-204ENST00000566278 4130 ntBASIC4.91□□□□□ -1.62
SPASTQ9UBP0 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SPASTQ9UBP0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.9□□□□□ -1.62
SPASTQ9UBP0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SPASTQ9UBP0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SPASTQ9UBP0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SPASTQ9UBP0 AP000756.2-201ENST00000624168 2567 ntBASIC4.9□□□□□ -1.62
SPASTQ9UBP0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SPASTQ9UBP0 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SPASTQ9UBP0 RNVU1-6-201ENST00000364688 164 ntBASIC4.9□□□□□ -1.63
SPASTQ9UBP0 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
SPASTQ9UBP0 AC093719.1-202ENST00000392735 373 ntBASIC4.9□□□□□ -1.63
SPASTQ9UBP0 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.9□□□□□ -1.63
SPASTQ9UBP0 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SPASTQ9UBP0 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.9□□□□□ -1.63
SPASTQ9UBP0 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.9□□□□□ -1.63
SPASTQ9UBP0 NIPA2P1-201ENST00000426223 976 ntBASIC4.9□□□□□ -1.63
SPASTQ9UBP0 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.9□□□□□ -1.63
SPASTQ9UBP0 AL138878.2-201ENST00000440581 1241 ntBASIC4.9□□□□□ -1.63
SPASTQ9UBP0 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms