Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 RNU1-1-201ENST00000383925 164 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 RNVU1-18-201ENST00000384010 164 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 RNU1-2-201ENST00000384278 164 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 RNU1-4-201ENST00000384659 164 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 RNU1-3-201ENST00000384782 164 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 PHBP1-201ENST00000392260 808 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 RNA5SP209-201ENST00000411237 97 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 AL590632.1-201ENST00000424289 371 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 RPL21P112-201ENST00000434403 463 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 HIST1H2APS6-201ENST00000448609 364 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 RN7SL308P-201ENST00000464971 297 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 RN7SL333P-201ENST00000476398 297 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 RPS24P16-201ENST00000497294 392 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 AC027808.2-203ENST00000558261 638 ntTSL 5 BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 AC068802.1-201ENST00000603420 732 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 U1.40-201ENST00000610976 164 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 U1.27-201ENST00000615842 164 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 AC119619.1-201ENST00000619728 112 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 HBG1-202ENST00000632727 369 ntTSL 3 BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 PALM2-AKAP2-202ENST00000374530 7507 ntTSL 2 BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 SAMMSON-226ENST00000642089 1582 ntBASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 MOSPD1-203ENST00000370783 2364 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC11.92□□□□□ -0.5
SCAF1Q9H7N4 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 FHL1-203ENST00000370676 833 ntTSL 5 BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 RNU6-804P-201ENST00000384286 107 ntBASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 AC099535.1-201ENST00000408928 371 ntBASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 AC010154.1-201ENST00000425857 269 ntBASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 AC091286.1-201ENST00000431233 461 ntBASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 AC011225.1-201ENST00000457751 369 ntBASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 RN7SL146P-201ENST00000472338 297 ntBASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 RNU6-307P-201ENST00000516743 106 ntBASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 RNU6-844P-201ENST00000517175 102 ntBASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 LINC01170-201ENST00000519703 406 ntTSL 5 BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 COX6CP8-201ENST00000522620 226 ntBASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 LINC00681-201ENST00000530150 504 ntTSL 2 BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 AC090651.1-201ENST00000567865 634 ntBASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 MIR3146-201ENST00000580367 79 ntBASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 AC005779.1-201ENST00000591569 540 ntTSL 3 BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 LAMA3-207ENST00000587184 5007 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 USP17L21-202ENST00000621388 1677 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 MFSD8-217ENST00000641178 4374 ntBASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 AC022507.1-201ENST00000548349 1505 ntBASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC11.91□□□□□ -0.5
SCAF1Q9H7N4 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 AL034417.4-202ENST00000642135 2236 ntBASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 MIR411-201ENST00000362239 96 ntBASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 RNU6-744P-201ENST00000365557 107 ntBASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 RNU6-1316P-201ENST00000384242 108 ntBASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 MIR138-2-201ENST00000384916 84 ntBASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 HMGB1P17-201ENST00000403495 628 ntBASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 LINC00385-201ENST00000435044 374 ntTSL 3 BASIC11.9□□□□□ -0.5
SCAF1Q9H7N4 Z97634.1-203ENST00000435229 471 ntBASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms