Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AL158163.1-201ENST00000603915 1649 ntBASIC6.82□□□□□ -1.32
SCAPERQ9BY12 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
SCAPERQ9BY12 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCAPERQ9BY12 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.82□□□□□ -1.32
SCAPERQ9BY12 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SCAPERQ9BY12 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.82□□□□□ -1.32
SCAPERQ9BY12 DHX9P1-201ENST00000436565 3076 ntBASIC6.82□□□□□ -1.32
SCAPERQ9BY12 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCAPERQ9BY12 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SCAPERQ9BY12 SNORA62.3-201ENST00000365110 153 ntBASIC6.82□□□□□ -1.32
SCAPERQ9BY12 TRAV35-201ENST00000390462 330 ntBASIC6.82□□□□□ -1.32
SCAPERQ9BY12 SNRPFP1-201ENST00000414761 252 ntBASIC6.82□□□□□ -1.32
SCAPERQ9BY12 AL935212.3-201ENST00000450729 284 ntBASIC6.82□□□□□ -1.32
SCAPERQ9BY12 RPS27AP13-201ENST00000498403 237 ntBASIC6.82□□□□□ -1.32
SCAPERQ9BY12 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.82□□□□□ -1.32
SCAPERQ9BY12 AC008958.1-201ENST00000511047 682 ntBASIC6.82□□□□□ -1.32
SCAPERQ9BY12 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.82□□□□□ -1.32
SCAPERQ9BY12 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC6.82□□□□□ -1.32
SCAPERQ9BY12 AC024220.1-201ENST00000603675 484 ntBASIC6.82□□□□□ -1.32
SCAPERQ9BY12 AC067931.1-201ENST00000624190 671 ntBASIC6.82□□□□□ -1.32
SCAPERQ9BY12 LINC01808-202ENST00000641680 1116 ntBASIC6.82□□□□□ -1.32
SCAPERQ9BY12 AC011755.1-201ENST00000623763 2049 ntBASIC6.82□□□□□ -1.32
SCAPERQ9BY12 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SCAPERQ9BY12 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
SCAPERQ9BY12 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
SCAPERQ9BY12 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SCAPERQ9BY12 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.81□□□□□ -1.32
SCAPERQ9BY12 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCAPERQ9BY12 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCAPERQ9BY12 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCAPERQ9BY12 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SCAPERQ9BY12 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCAPERQ9BY12 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.81□□□□□ -1.32
SCAPERQ9BY12 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCAPERQ9BY12 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC6.81□□□□□ -1.32
SCAPERQ9BY12 AC013429.2-201ENST00000418798 781 ntBASIC6.81□□□□□ -1.32
SCAPERQ9BY12 AC117434.1-201ENST00000419971 836 ntBASIC6.81□□□□□ -1.32
SCAPERQ9BY12 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC6.81□□□□□ -1.32
SCAPERQ9BY12 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.81□□□□□ -1.32
SCAPERQ9BY12 RPL35P6-201ENST00000490024 372 ntBASIC6.81□□□□□ -1.32
SCAPERQ9BY12 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.81□□□□□ -1.32
SCAPERQ9BY12 AC039056.2-201ENST00000622261 511 ntBASIC6.81□□□□□ -1.32
SCAPERQ9BY12 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SCAPERQ9BY12 LINC00622-201ENST00000562811 1570 ntBASIC6.81□□□□□ -1.32
SCAPERQ9BY12 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCAPERQ9BY12 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
SCAPERQ9BY12 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC6.8□□□□□ -1.32
SCAPERQ9BY12 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SCAPERQ9BY12 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SCAPERQ9BY12 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SCAPERQ9BY12 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SCAPERQ9BY12 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.8□□□□□ -1.32
SCAPERQ9BY12 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SCAPERQ9BY12 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SCAPERQ9BY12 RNU6-761P-201ENST00000384148 107 ntBASIC6.8□□□□□ -1.32
SCAPERQ9BY12 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC6.8□□□□□ -1.32
SCAPERQ9BY12 MTND4LP31-201ENST00000514859 294 ntBASIC6.8□□□□□ -1.32
SCAPERQ9BY12 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC6.8□□□□□ -1.32
SCAPERQ9BY12 LSM3P2-201ENST00000551246 273 ntBASIC6.8□□□□□ -1.32
SCAPERQ9BY12 AC006116.5-201ENST00000591936 559 ntBASIC6.8□□□□□ -1.32
SCAPERQ9BY12 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.8□□□□□ -1.32
SCAPERQ9BY12 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SCAPERQ9BY12 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SCAPERQ9BY12 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC6.8□□□□□ -1.32
SCAPERQ9BY12 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SCAPERQ9BY12 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SCAPERQ9BY12 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCAPERQ9BY12 RNA5SP387-201ENST00000364226 106 ntBASIC6.79□□□□□ -1.32
SCAPERQ9BY12 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SCAPERQ9BY12 UBBP2-201ENST00000376781 231 ntBASIC6.79□□□□□ -1.32
SCAPERQ9BY12 AC009237.10-201ENST00000414112 510 ntBASIC6.79□□□□□ -1.32
SCAPERQ9BY12 NPM1P26-201ENST00000426339 738 ntBASIC6.79□□□□□ -1.32
SCAPERQ9BY12 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.79□□□□□ -1.32
SCAPERQ9BY12 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.79□□□□□ -1.32
SCAPERQ9BY12 AP001804.2-201ENST00000533932 910 ntBASIC6.79□□□□□ -1.32
SCAPERQ9BY12 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.79□□□□□ -1.32
SCAPERQ9BY12 AGGF1P6-201ENST00000569213 976 ntBASIC6.79□□□□□ -1.32
SCAPERQ9BY12 MIR4286-201ENST00000580651 93 ntBASIC6.79□□□□□ -1.32
SCAPERQ9BY12 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.79□□□□□ -1.32
SCAPERQ9BY12 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.79□□□□□ -1.32
SCAPERQ9BY12 AC004777.1-201ENST00000624317 287 ntBASIC6.79□□□□□ -1.32
SCAPERQ9BY12 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
SCAPERQ9BY12 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
SCAPERQ9BY12 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SCAPERQ9BY12 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCAPERQ9BY12 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 SNORA11.1-201ENST00000408133 129 ntBASIC6.78□□□□□ -1.32
SCAPERQ9BY12 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 RPL35AP21-201ENST00000437667 333 ntBASIC6.78□□□□□ -1.32
SCAPERQ9BY12 AC079804.1-201ENST00000461922 436 ntBASIC6.78□□□□□ -1.32
SCAPERQ9BY12 RPL7L1P8-201ENST00000469911 741 ntBASIC6.78□□□□□ -1.32
SCAPERQ9BY12 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.78□□□□□ -1.32
SCAPERQ9BY12 AC091959.2-201ENST00000477363 321 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms