Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 MTCO1P54-201ENST00000430139 712 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AL050321.1-201ENST00000432363 400 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC069154.1-201ENST00000432914 542 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 RPS25P9-201ENST00000435591 252 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AL450263.2-201ENST00000439400 589 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 RPS4XP12-201ENST00000461747 709 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC104108.1-201ENST00000509930 412 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC091133.4-201ENST00000511142 308 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC073581.1-201ENST00000519036 575 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 OR5AQ1P-201ENST00000527596 927 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC012146.2-201ENST00000576545 416 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 MIR3671-201ENST00000580455 88 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 SMIM12P1-201ENST00000603004 274 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC073046.2-201ENST00000604756 527 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC097467.4-201ENST00000605504 141 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AL162730.1-201ENST00000605734 292 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 uc_338.31-201ENST00000615595 186 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 MIR6721-201ENST00000617181 87 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AL139089.1-201ENST00000620372 975 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC073592.6-201ENST00000624271 415 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC073593.1-201ENST00000624500 411 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC024023.1-201ENST00000624530 922 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC111152.1-202ENST00000635848 339 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 OR52B5P-202ENST00000641118 1110 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AL662795.2-201ENST00000624252 3706 ntBASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSBP3Q9BWW4 AC005332.9-201ENST00000620266 2921 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 AL157831.2-201ENST00000564681 3095 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 AP004289.1-201ENST00000436307 2205 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 Y_RNA.160-201ENST00000363677 92 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 RNA5SP279-201ENST00000365513 117 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 MIR525-201ENST00000384978 85 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 ATP5HP3-201ENST00000396994 486 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 YWHAZP6-201ENST00000399764 738 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 AL139805.1-201ENST00000407837 289 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 MIR1302-11-201ENST00000408051 138 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 MIR1302-9-201ENST00000408365 138 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 MIR1302-10-201ENST00000408734 138 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 RNA5SP198-201ENST00000410376 127 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 C1DP2-201ENST00000418167 426 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 RPL7P44-201ENST00000424827 742 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 ELOCP14-201ENST00000428070 331 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 NDUFA5P4-201ENST00000436704 385 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 ELOCP7-201ENST00000439968 331 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 AL645936.1-201ENST00000441979 518 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 OR7E125P-201ENST00000443450 846 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 AC244505.5-201ENST00000443639 207 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 VN1R38P-201ENST00000450265 887 ntBASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SSBP3Q9BWW4 BX322784.1-201ENST00000455793 1077 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms