Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 AL627171.1-201ENST00000618845 1308 ntBASIC4.7□□□□□ -1.66
LINC00346Q8IVM7 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 RNU4-44P-201ENST00000363050 141 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 RNU1-87P-201ENST00000363727 170 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 RNA5SP234-201ENST00000363916 119 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 RNU6-1000P-201ENST00000391066 106 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AL355143.1-201ENST00000407101 841 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 RN7SKP286-201ENST00000410894 299 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 RPL12P9-201ENST00000412942 488 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 HSPD1P12-201ENST00000429127 1069 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AC124944.2-201ENST00000429866 1242 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 RPL21P110-201ENST00000433345 446 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AC012075.1-201ENST00000436549 580 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 RPS10P18-201ENST00000442662 495 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 RPL31P15-201ENST00000449770 338 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AC104634.1-201ENST00000452720 462 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 DNAJC19P8-201ENST00000452887 259 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 CDC42P1-201ENST00000456658 548 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 APOOP2-201ENST00000461561 539 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 ATP5G1P3-201ENST00000463301 410 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AC092905.1-201ENST00000467527 949 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 RPL7P41-201ENST00000485823 957 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 RPL15P21-201ENST00000495592 567 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AC093801.2-201ENST00000503966 1050 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AC008494.2-201ENST00000514544 370 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 HMGB1P23-201ENST00000518743 568 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AC015720.2-201ENST00000567709 334 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AC092953.2-201ENST00000608000 699 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AC015982.1-201ENST00000608113 465 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AC243756.2-201ENST00000618406 463 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AC138965.3-201ENST00000623875 498 ntBASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LINC00346Q8IVM7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 RNU6-236P-201ENST00000363886 106 ntBASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 AC007618.1-201ENST00000366455 732 ntBASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 MIR1282-201ENST00000408865 101 ntBASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 SDHDP6-201ENST00000414693 480 ntBASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 AC011242.1-201ENST00000433596 1158 ntBASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 CEACAMP1-201ENST00000434624 1035 ntBASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 AL161636.2-201ENST00000445179 927 ntBASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.68□□□□□ -1.66
LINC00346Q8IVM7 AL929288.2-201ENST00000446368 407 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms