Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL512646.1-201ENST00000269395 1077 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 FAM133CP-201ENST00000332869 704 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 RNA5SP211-201ENST00000365516 117 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 RNU2-65P-201ENST00000410162 185 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 METTL15P3-201ENST00000415522 1221 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 MTCO1P54-201ENST00000430139 712 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 CFL1P1-202ENST00000432948 411 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 FMO7P-201ENST00000436045 768 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 RPS12P17-201ENST00000438591 377 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 MED28P3-201ENST00000444288 531 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 AC005297.1-201ENST00000444765 862 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 OR6K5P-201ENST00000447050 945 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 AC093755.1-201ENST00000512950 1023 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 BX510359.5-201ENST00000515651 304 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 SCARNA6.1-201ENST00000516989 238 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 C1GALT1P3-201ENST00000522049 819 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 BNIP3P24-201ENST00000593398 557 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 AL355816.1-201ENST00000607951 118 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 AC007204.2-201ENST00000615022 616 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 AC234782.5-201ENST00000617723 324 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 AC116563.2-201ENST00000624751 535 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 AC134882.1-201ENST00000603738 1676 ntBASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC144BQ3MJ40 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 AC104454.1-201ENST00000421341 1401 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 SRRM1P3-201ENST00000426911 2678 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 AC235565.1-201ENST00000456962 1325 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 NF1-214ENST00000490416 1329 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 AC093671.1-201ENST00000624981 2929 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 RNU6-560P-201ENST00000364007 108 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 GSTA8P-201ENST00000404253 637 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 COX7BP2-201ENST00000437976 242 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 PPIAP17-201ENST00000438507 471 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 AC092013.1-201ENST00000438795 332 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 ACTR3P2-201ENST00000439585 1257 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 AC079776.3-201ENST00000450665 370 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 AC015724.1-201ENST00000478577 156 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 AP000563.1-201ENST00000490865 758 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 FABP5P12-201ENST00000515543 389 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 RN7SKP253-201ENST00000516424 309 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 SEPT10P1-201ENST00000517342 1162 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 MRPS16P1-201ENST00000523462 412 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 MIR4260-201ENST00000583107 67 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 BNIP3P26-201ENST00000600827 554 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 AC005840.5-201ENST00000619166 599 ntBASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC144BQ3MJ40 CR392039.4-201ENST00000624968 501 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms