Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 MAPK10-320ENST00000641462 6696 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC006042.3-201ENST00000454684 1469 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC074029.4-201ENST00000624796 1859 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AL672167.1-205ENST00000641112 3080 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AL133388.1-201ENST00000404509 287 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 RN7SKP125-201ENST00000410481 302 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 Z93019.1-201ENST00000416450 973 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 TMBIM7P-201ENST00000418074 855 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AL035458.1-201ENST00000433096 585 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 EEF1B2P6-201ENST00000445713 673 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 RN7SL51P-201ENST00000468230 285 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 RN7SL174P-201ENST00000475578 289 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC090686.1-201ENST00000481577 749 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC097173.1-201ENST00000505862 819 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC106872.4-201ENST00000510050 523 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 RN7SKP99-201ENST00000517028 307 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 IGKV3D-34-201ENST00000522638 302 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC022790.1-201ENST00000522872 204 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC093014.1-201ENST00000548926 724 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC063949.1-201ENST00000552900 865 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AL049830.4-201ENST00000555149 351 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC015720.2-201ENST00000567709 334 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC027243.2-201ENST00000602530 724 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC073137.1-201ENST00000605636 634 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 MIR1264-201ENST00000616374 69 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AL645927.2-201ENST00000618350 349 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 U6.48-201ENST00000618523 106 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 RNF6P1-201ENST00000444889 1784 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 Z73965.1-201ENST00000623412 2297 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 AC092162.3-201ENST00000624511 1624 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 USP9YP4-201ENST00000424401 1745 ntBASIC4.24□□□□□ -1.73
ANKRD55Q3KP44 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
ANKRD55Q3KP44 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ANKRD55Q3KP44 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
ANKRD55Q3KP44 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.23□□□□□ -1.73
ANKRD55Q3KP44 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ANKRD55Q3KP44 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.23□□□□□ -1.73
ANKRD55Q3KP44 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
ANKRD55Q3KP44 AL133268.1-201ENST00000405676 1401 ntBASIC4.23□□□□□ -1.73
ANKRD55Q3KP44 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.23□□□□□ -1.73
ANKRD55Q3KP44 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ANKRD55Q3KP44 AL353743.4-201ENST00000422653 1547 ntBASIC4.23□□□□□ -1.73
ANKRD55Q3KP44 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ANKRD55Q3KP44 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
ANKRD55Q3KP44 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
ANKRD55Q3KP44 RNA5SP319-201ENST00000362768 119 ntBASIC4.23□□□□□ -1.73
ANKRD55Q3KP44 OR6K3-202ENST00000368146 996 ntBASIC4.23□□□□□ -1.73
ANKRD55Q3KP44 MIR142-201ENST00000384835 87 ntBASIC4.23□□□□□ -1.73
ANKRD55Q3KP44 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.23□□□□□ -1.73
ANKRD55Q3KP44 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.23□□□□□ -1.73
ANKRD55Q3KP44 AL662874.1-201ENST00000426065 230 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms