Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 CDC42P1-201ENST00000456658 548 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 AC023141.9-201ENST00000458734 412 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 AC021660.1-201ENST00000465006 554 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CL1P78423 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.31□□□□□ -1.72
CX3CL1P78423 HMGB1P44-201ENST00000508597 572 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 AC016559.2-201ENST00000510759 359 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CL1P78423 HMGB1P23-201ENST00000518743 568 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CL1P78423 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CL1P78423 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.31□□□□□ -1.72
CX3CL1P78423 MORF4L1P3-201ENST00000525966 950 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.31□□□□□ -1.72
CX3CL1P78423 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CL1P78423 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CL1P78423 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CL1P78423 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CL1P78423 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CL1P78423 AC040958.1-201ENST00000561102 201 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 RN7SL290P-201ENST00000578661 300 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 SNORD95-201ENST00000579879 68 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CL1P78423 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CL1P78423 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.31□□□□□ -1.72
CX3CL1P78423 AL122125.1-201ENST00000616999 600 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CL1P78423 AL121594.5-201ENST00000631724 573 ntBASIC4.31□□□□□ -1.72
CX3CL1P78423 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CL1P78423 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.31□□□□□ -1.72
CX3CL1P78423 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CL1P78423 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.31□□□□□ -1.72
CX3CL1P78423 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CL1P78423 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CL1P78423 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CL1P78423 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CL1P78423 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CX3CL1P78423 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CL1P78423 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.3□□□□□ -1.72
CX3CL1P78423 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CL1P78423 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CX3CL1P78423 BX005019.1-201ENST00000561881 1810 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 AC100757.1-201ENST00000616872 1835 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CL1P78423 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CX3CL1P78423 TRIM51GP-201ENST00000534741 1350 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.3□□□□□ -1.72
CX3CL1P78423 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CX3CL1P78423 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CL1P78423 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CL1P78423 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 AC104446.1-201ENST00000613728 1321 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CL1P78423 NSRP1P1-201ENST00000444067 1693 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CL1P78423 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 RNU6-236P-201ENST00000363886 106 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.3□□□□□ -1.72
CX3CL1P78423 SNORA16A-201ENST00000384342 137 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 MIR92A2-201ENST00000385299 75 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.3□□□□□ -1.72
CX3CL1P78423 COX5BP7-201ENST00000414780 274 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 AL513325.1-201ENST00000417716 1034 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.3□□□□□ -1.72
CX3CL1P78423 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.3□□□□□ -1.72
CX3CL1P78423 SRSF1P1-201ENST00000424058 520 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 MTCO2P17-201ENST00000424336 677 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 OSTCP5-201ENST00000425293 453 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.3□□□□□ -1.72
CX3CL1P78423 GSTM5P1-201ENST00000434751 660 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.3□□□□□ -1.72
CX3CL1P78423 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.3□□□□□ -1.72
CX3CL1P78423 AL358794.1-201ENST00000445689 381 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.3□□□□□ -1.72
CX3CL1P78423 AC005002.1-201ENST00000447458 540 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.3□□□□□ -1.72
CX3CL1P78423 MTND2P8-201ENST00000450555 1025 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 RPL7P61-201ENST00000451721 751 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 AC244505.3-201ENST00000454598 187 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.3□□□□□ -1.72
CX3CL1P78423 RPL6P9-201ENST00000466502 859 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 RPL35AP19-201ENST00000469425 329 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 AC100832.1-201ENST00000471945 383 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 AC092754.1-201ENST00000472975 479 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CX3CL1P78423 AL035404.1-201ENST00000497982 568 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 AC023050.1-201ENST00000498198 304 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.3□□□□□ -1.72
CX3CL1P78423 MYL12BP2-201ENST00000503948 512 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.3□□□□□ -1.72
CX3CL1P78423 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CX3CL1P78423 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.3□□□□□ -1.72
CX3CL1P78423 AC119751.1-201ENST00000513357 765 ntBASIC4.3□□□□□ -1.72
CX3CL1P78423 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.3□□□□□ -1.72
CX3CL1P78423 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.3□□□□□ -1.72
CX3CL1P78423 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.3□□□□□ -1.72
CX3CL1P78423 SCARNA20.4-201ENST00000516969 131 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms