Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SEC61A1P61619 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SEC61A1P61619 CIR1P2-201ENST00000514821 1342 ntBASIC4.7□□□□□ -1.66
SEC61A1P61619 AC004817.4-201ENST00000602396 3625 ntBASIC4.7□□□□□ -1.66
SEC61A1P61619 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SEC61A1P61619 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A1P61619 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SEC61A1P61619 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A1P61619 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A1P61619 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A1P61619 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A1P61619 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.69□□□□□ -1.66
SEC61A1P61619 AC100778.3-201ENST00000580060 1750 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SEC61A1P61619 SNORD56.4-201ENST00000363883 71 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 RNA5SP132-201ENST00000364725 118 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 OR1L6-202ENST00000373684 1044 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 RNU6-1320P-201ENST00000390838 107 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 RNU6-1269P-201ENST00000391139 107 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 RNU4-22P-201ENST00000411058 166 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 RNU4-74P-201ENST00000411280 161 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 RPL22P18-201ENST00000417197 377 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 PNRC2P1-201ENST00000423940 420 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 NANOGP4-201ENST00000427230 913 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 AC000041.1-201ENST00000439655 175 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.69□□□□□ -1.66
SEC61A1P61619 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.69□□□□□ -1.66
SEC61A1P61619 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.69□□□□□ -1.66
SEC61A1P61619 AC016772.1-201ENST00000444170 1261 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 AL450996.1-201ENST00000445574 1202 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 AC069540.1-201ENST00000446320 988 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 OR6K5P-201ENST00000447050 945 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A1P61619 AL096803.2-201ENST00000450032 677 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.69□□□□□ -1.66
SEC61A1P61619 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.69□□□□□ -1.66
SEC61A1P61619 RANP1-206ENST00000455094 651 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 PTGES3P5-201ENST00000455109 434 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 RNU6-599P-201ENST00000459383 107 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 RNU6-1193P-201ENST00000459461 107 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 AC110749.1-201ENST00000462007 357 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.69□□□□□ -1.66
SEC61A1P61619 AC074386.1-201ENST00000476560 767 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 RN7SL184P-201ENST00000488308 297 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 AC025459.1-201ENST00000504072 156 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.69□□□□□ -1.66
SEC61A1P61619 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.69□□□□□ -1.66
SEC61A1P61619 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
SEC61A1P61619 EIF3KP3-201ENST00000514461 639 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 MRPS36P3-201ENST00000519284 130 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 AC013701.1-201ENST00000522657 465 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.69□□□□□ -1.66
SEC61A1P61619 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.69□□□□□ -1.66
SEC61A1P61619 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.69□□□□□ -1.66
SEC61A1P61619 AC007834.2-201ENST00000536310 343 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.69□□□□□ -1.66
SEC61A1P61619 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.69□□□□□ -1.66
SEC61A1P61619 RBM22P12-201ENST00000567098 1255 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 Z94722.1-201ENST00000604328 474 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 AC107952.2-201ENST00000606048 486 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.69□□□□□ -1.66
SEC61A1P61619 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.69□□□□□ -1.66
SEC61A1P61619 RNU6-368P-201ENST00000620928 107 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 RNU6-538P-201ENST00000622329 107 ntBASIC4.69□□□□□ -1.66
SEC61A1P61619 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.69□□□□□ -1.66
SEC61A1P61619 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.69□□□□□ -1.66
SEC61A1P61619 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
SEC61A1P61619 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SEC61A1P61619 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A1P61619 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A1P61619 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A1P61619 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.69□□□□□ -1.66
SEC61A1P61619 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SEC61A1P61619 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SEC61A1P61619 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SEC61A1P61619 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SEC61A1P61619 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.68□□□□□ -1.66
SEC61A1P61619 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SEC61A1P61619 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SEC61A1P61619 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SEC61A1P61619 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
SEC61A1P61619 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SEC61A1P61619 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SEC61A1P61619 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.68□□□□□ -1.66
SEC61A1P61619 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SEC61A1P61619 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.68□□□□□ -1.66
SEC61A1P61619 RN7SKP160-201ENST00000363804 340 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 RNU4-28P-201ENST00000364739 141 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SEC61A1P61619 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SEC61A1P61619 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.68□□□□□ -1.66
SEC61A1P61619 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
SEC61A1P61619 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.68□□□□□ -1.66
SEC61A1P61619 AC107081.1-201ENST00000414975 361 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.68□□□□□ -1.66
SEC61A1P61619 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.68□□□□□ -1.66
SEC61A1P61619 RPL7P56-201ENST00000429441 717 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.68□□□□□ -1.66
SEC61A1P61619 AC019185.1-201ENST00000442718 389 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms