Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CLDN18P56856 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN18P56856 TRIM60P17-201ENST00000415181 719 ntBASIC4.31□□□□□ -1.72
CLDN18P56856 AC019050.1-201ENST00000418508 492 ntBASIC4.31□□□□□ -1.72
CLDN18P56856 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.31□□□□□ -1.72
CLDN18P56856 AL357520.1-201ENST00000441557 453 ntBASIC4.31□□□□□ -1.72
CLDN18P56856 HMGB3P9-201ENST00000441799 583 ntBASIC4.31□□□□□ -1.72
CLDN18P56856 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN18P56856 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN18P56856 AL513533.1-201ENST00000453728 415 ntBASIC4.31□□□□□ -1.72
CLDN18P56856 SEPT7P6-201ENST00000469999 1143 ntBASIC4.31□□□□□ -1.72
CLDN18P56856 ENPP7P9-201ENST00000514456 627 ntBASIC4.31□□□□□ -1.72
CLDN18P56856 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN18P56856 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN18P56856 AC005868.1-201ENST00000536421 331 ntBASIC4.31□□□□□ -1.72
CLDN18P56856 AL049830.4-201ENST00000555149 351 ntBASIC4.31□□□□□ -1.72
CLDN18P56856 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN18P56856 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.31□□□□□ -1.72
CLDN18P56856 AC090312.1-201ENST00000580637 348 ntBASIC4.31□□□□□ -1.72
CLDN18P56856 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN18P56856 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN18P56856 AC233280.2-201ENST00000603917 1070 ntBASIC4.31□□□□□ -1.72
CLDN18P56856 AC098935.2-201ENST00000604222 466 ntBASIC4.31□□□□□ -1.72
CLDN18P56856 AC133552.5-201ENST00000604266 540 ntBASIC4.31□□□□□ -1.72
CLDN18P56856 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN18P56856 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN18P56856 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN18P56856 AC145207.9-201ENST00000623802 325 ntBASIC4.31□□□□□ -1.72
CLDN18P56856 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN18P56856 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN18P56856 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN18P56856 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CLDN18P56856 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CLDN18P56856 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN18P56856 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN18P56856 DDX18P3-201ENST00000404856 2007 ntBASIC4.31□□□□□ -1.72
CLDN18P56856 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN18P56856 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CLDN18P56856 AC007382.1-201ENST00000624376 2618 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 OR14L1P-202ENST00000641545 3009 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN18P56856 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN18P56856 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN18P56856 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN18P56856 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN18P56856 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN18P56856 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CLDN18P56856 MT-TP-201ENST00000387461 68 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 MIR298-201ENST00000401212 88 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN18P56856 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN18P56856 AC104333.2-201ENST00000422630 192 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN18P56856 AL359265.2-201ENST00000434367 631 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 AL451139.1-201ENST00000434718 346 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN18P56856 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN18P56856 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN18P56856 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN18P56856 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN18P56856 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN18P56856 AC073264.2-201ENST00000448886 166 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN18P56856 C1DP3-201ENST00000455013 423 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.3□□□□□ -1.72
CLDN18P56856 AC022795.1-201ENST00000473808 480 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN18P56856 AC091868.1-201ENST00000508746 304 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.3□□□□□ -1.72
CLDN18P56856 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN18P56856 RNU1-6P-201ENST00000516290 144 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN18P56856 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN18P56856 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN18P56856 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN18P56856 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN18P56856 BNIP3P1-201ENST00000547295 580 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.3□□□□□ -1.72
CLDN18P56856 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN18P56856 AC093249.4-201ENST00000564755 259 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.3□□□□□ -1.72
CLDN18P56856 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.3□□□□□ -1.72
CLDN18P56856 AC068790.7-201ENST00000602347 528 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN18P56856 MIR7703-201ENST00000620784 77 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 AC012414.7-202ENST00000622705 1090 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN18P56856 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN18P56856 AC073869.10-201ENST00000642016 354 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 ASNSP1-201ENST00000518311 1939 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 AL442639.1-201ENST00000625030 1899 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 CASC19-284ENST00000642142 1868 ntBASIC4.3□□□□□ -1.72
CLDN18P56856 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
CLDN18P56856 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.3□□□□□ -1.72
CLDN18P56856 AC010928.1-201ENST00000592477 1447 ntBASIC4.29□□□□□ -1.72
CLDN18P56856 AL592182.3-201ENST00000642132 3304 ntBASIC4.29□□□□□ -1.72
CLDN18P56856 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.29□□□□□ -1.72
CLDN18P56856 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN18P56856 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLDN18P56856 NEAT1-202ENST00000501122 22743 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms