Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.85□□□□□ -1.63
LIMK2P53671 AC245028.1-201ENST00000423259 256 ntBASIC4.85□□□□□ -1.63
LIMK2P53671 AC012519.1-201ENST00000424588 610 ntBASIC4.85□□□□□ -1.63
LIMK2P53671 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.85□□□□□ -1.63
LIMK2P53671 RPL7P11-201ENST00000437586 658 ntBASIC4.85□□□□□ -1.63
LIMK2P53671 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.85□□□□□ -1.63
LIMK2P53671 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.85□□□□□ -1.63
LIMK2P53671 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.85□□□□□ -1.63
LIMK2P53671 OR52J1P-201ENST00000450596 932 ntBASIC4.85□□□□□ -1.63
LIMK2P53671 MTND3P4-201ENST00000453537 303 ntBASIC4.85□□□□□ -1.63
LIMK2P53671 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.85□□□□□ -1.63
LIMK2P53671 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.85□□□□□ -1.63
LIMK2P53671 AC116562.1-201ENST00000485355 781 ntBASIC4.85□□□□□ -1.63
LIMK2P53671 IGLV2-34-201ENST00000490007 283 ntBASIC4.85□□□□□ -1.63
LIMK2P53671 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.85□□□□□ -1.63
LIMK2P53671 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.85□□□□□ -1.63
LIMK2P53671 OR7H2P-201ENST00000513483 306 ntBASIC4.85□□□□□ -1.63
LIMK2P53671 RNU6-709P-201ENST00000517257 104 ntBASIC4.85□□□□□ -1.63
LIMK2P53671 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.85□□□□□ -1.63
LIMK2P53671 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.85□□□□□ -1.63
LIMK2P53671 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.85□□□□□ -1.63
LIMK2P53671 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.85□□□□□ -1.63
LIMK2P53671 AC087477.6-201ENST00000559595 843 ntBASIC4.85□□□□□ -1.63
LIMK2P53671 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.85□□□□□ -1.63
LIMK2P53671 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.85□□□□□ -1.63
LIMK2P53671 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.85□□□□□ -1.63
LIMK2P53671 SNORA74C-1-201ENST00000580726 201 ntBASIC4.85□□□□□ -1.63
LIMK2P53671 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.85□□□□□ -1.63
LIMK2P53671 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.85□□□□□ -1.63
LIMK2P53671 AC097505.1-201ENST00000610199 565 ntBASIC4.85□□□□□ -1.63
LIMK2P53671 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LIMK2P53671 AC010435.1-201ENST00000623353 1177 ntBASIC4.85□□□□□ -1.63
LIMK2P53671 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.85□□□□□ -1.63
LIMK2P53671 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LIMK2P53671 SOCS5P3-201ENST00000425115 1576 ntBASIC4.85□□□□□ -1.63
LIMK2P53671 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LIMK2P53671 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
LIMK2P53671 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LIMK2P53671 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
LIMK2P53671 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
LIMK2P53671 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
LIMK2P53671 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.85□□□□□ -1.63
LIMK2P53671 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LIMK2P53671 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.84□□□□□ -1.63
LIMK2P53671 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LIMK2P53671 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
LIMK2P53671 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LIMK2P53671 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.84□□□□□ -1.63
LIMK2P53671 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.84□□□□□ -1.63
LIMK2P53671 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LIMK2P53671 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LIMK2P53671 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.84□□□□□ -1.63
LIMK2P53671 RNU6-152P-201ENST00000384037 107 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 MIR192-201ENST00000384915 110 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 SNORD65-201ENST00000391079 73 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.84□□□□□ -1.63
LIMK2P53671 AC019070.1-201ENST00000415008 1024 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 AL807761.1-201ENST00000417622 171 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 AL445528.1-201ENST00000426330 420 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 TRIM60P13-201ENST00000432350 1283 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 AC004938.1-201ENST00000438468 308 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 AC114878.1-201ENST00000441166 358 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 BTBD7P2-201ENST00000441962 620 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 AL157884.3-201ENST00000448273 1184 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.84□□□□□ -1.63
LIMK2P53671 RPS29P33-201ENST00000456717 146 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 AC063943.1-201ENST00000465434 453 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 RN7SL738P-201ENST00000470264 297 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.84□□□□□ -1.63
LIMK2P53671 AC006463.2-201ENST00000473326 348 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 RN7SL558P-201ENST00000497468 299 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.84□□□□□ -1.63
LIMK2P53671 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LIMK2P53671 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.84□□□□□ -1.63
LIMK2P53671 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.84□□□□□ -1.63
LIMK2P53671 RNA5SP392-201ENST00000516905 112 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.84□□□□□ -1.63
LIMK2P53671 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.84□□□□□ -1.63
LIMK2P53671 UBE2FP2-201ENST00000566646 462 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.84□□□□□ -1.63
LIMK2P53671 MIR4270-201ENST00000581799 70 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 AC010424.2-201ENST00000607594 443 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 AL161616.1-201ENST00000611867 286 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 uc_338.18-201ENST00000615451 175 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 AC009032.1-201ENST00000617574 431 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 AL109620.1-201ENST00000618738 1197 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 AL022401.1-201ENST00000619498 108 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 AC015804.1-201ENST00000622935 435 ntBASIC4.84□□□□□ -1.63
LIMK2P53671 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.84□□□□□ -1.63
LIMK2P53671 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.84□□□□□ -1.63
LIMK2P53671 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
LIMK2P53671 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LIMK2P53671 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
LIMK2P53671 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LIMK2P53671 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LIMK2P53671 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIMK2P53671 TTC39DP-201ENST00000416781 1688 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 SAMMSON-213ENST00000641336 1521 ntBASIC4.83□□□□□ -1.64
LIMK2P53671 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms