Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.84□□□□□ -1.31
USP11P51784 EIF5A2P1-201ENST00000564027 460 ntBASIC6.84□□□□□ -1.31
USP11P51784 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.84□□□□□ -1.31
USP11P51784 AC012254.3-201ENST00000591183 2117 ntBASIC6.84□□□□□ -1.31
USP11P51784 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.84□□□□□ -1.31
USP11P51784 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC6.84□□□□□ -1.31
USP11P51784 AL117336.2-201ENST00000602435 335 ntBASIC6.84□□□□□ -1.31
USP11P51784 AL136131.3-201ENST00000607600 188 ntBASIC6.84□□□□□ -1.31
USP11P51784 AC015922.4-201ENST00000612568 690 ntBASIC6.84□□□□□ -1.31
USP11P51784 AL352984.2-202ENST00000613699 155 ntBASIC6.84□□□□□ -1.31
USP11P51784 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
USP11P51784 MIR6778-201ENST00000617912 73 ntBASIC6.84□□□□□ -1.31
USP11P51784 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USP11P51784 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
USP11P51784 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
USP11P51784 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
USP11P51784 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.84□□□□□ -1.31
USP11P51784 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
USP11P51784 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
USP11P51784 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
USP11P51784 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.32
USP11P51784 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
USP11P51784 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
USP11P51784 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.83□□□□□ -1.32
USP11P51784 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
USP11P51784 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USP11P51784 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
USP11P51784 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USP11P51784 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USP11P51784 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
USP11P51784 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
USP11P51784 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USP11P51784 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.83□□□□□ -1.32
USP11P51784 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.83□□□□□ -1.32
USP11P51784 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
USP11P51784 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
USP11P51784 OR10R3P-201ENST00000361688 942 ntBASIC6.83□□□□□ -1.32
USP11P51784 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USP11P51784 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
USP11P51784 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
USP11P51784 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.83□□□□□ -1.32
USP11P51784 NMD3P2-201ENST00000421815 761 ntBASIC6.83□□□□□ -1.32
USP11P51784 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.83□□□□□ -1.32
USP11P51784 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USP11P51784 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.83□□□□□ -1.32
USP11P51784 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC6.83□□□□□ -1.32
USP11P51784 AC000111.3-201ENST00000433478 193 ntBASIC6.83□□□□□ -1.32
USP11P51784 AL731534.1-201ENST00000434711 269 ntBASIC6.83□□□□□ -1.32
USP11P51784 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.83□□□□□ -1.32
USP11P51784 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.83□□□□□ -1.32
USP11P51784 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.83□□□□□ -1.32
USP11P51784 SDC4P-201ENST00000453285 601 ntBASIC6.83□□□□□ -1.32
USP11P51784 SSXP1-201ENST00000453640 473 ntBASIC6.83□□□□□ -1.32
USP11P51784 RNA5SP269-201ENST00000459032 137 ntBASIC6.83□□□□□ -1.32
USP11P51784 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.83□□□□□ -1.32
USP11P51784 TMED11P-201ENST00000479478 690 ntBASIC6.83□□□□□ -1.32
USP11P51784 WBP1LP4-201ENST00000505043 344 ntBASIC6.83□□□□□ -1.32
USP11P51784 AC025458.1-201ENST00000506046 166 ntBASIC6.83□□□□□ -1.32
USP11P51784 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.83□□□□□ -1.32
USP11P51784 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
USP11P51784 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.83□□□□□ -1.32
USP11P51784 AL121839.1-201ENST00000556233 1185 ntBASIC6.83□□□□□ -1.32
USP11P51784 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC6.83□□□□□ -1.32
USP11P51784 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.83□□□□□ -1.32
USP11P51784 CYP2C60P-201ENST00000566088 139 ntBASIC6.83□□□□□ -1.32
USP11P51784 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC6.83□□□□□ -1.32
USP11P51784 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.83□□□□□ -1.32
USP11P51784 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.83□□□□□ -1.32
USP11P51784 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.83□□□□□ -1.32
USP11P51784 BNIP3P26-201ENST00000600827 554 ntBASIC6.83□□□□□ -1.32
USP11P51784 AC103881.1-201ENST00000603476 538 ntBASIC6.83□□□□□ -1.32
USP11P51784 AC064836.2-201ENST00000609491 462 ntBASIC6.83□□□□□ -1.32
USP11P51784 MIR6071-201ENST00000616741 78 ntBASIC6.83□□□□□ -1.32
USP11P51784 AC009704.2-201ENST00000618739 483 ntBASIC6.83□□□□□ -1.32
USP11P51784 AC073569.3-201ENST00000619055 682 ntBASIC6.83□□□□□ -1.32
USP11P51784 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
USP11P51784 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.83□□□□□ -1.32
USP11P51784 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.32
USP11P51784 AL121768.1-201ENST00000613917 2544 ntBASIC6.83□□□□□ -1.32
USP11P51784 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USP11P51784 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USP11P51784 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
USP11P51784 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.83□□□□□ -1.32
USP11P51784 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
USP11P51784 AL022323.4-201ENST00000623980 13120 ntBASIC6.83□□□□□ -1.32
USP11P51784 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USP11P51784 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.82□□□□□ -1.32
USP11P51784 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.82□□□□□ -1.32
USP11P51784 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USP11P51784 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USP11P51784 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USP11P51784 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
USP11P51784 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
USP11P51784 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.82□□□□□ -1.32
USP11P51784 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
USP11P51784 AC093719.1-202ENST00000392735 373 ntBASIC6.82□□□□□ -1.32
USP11P51784 FGF7P8-201ENST00000402994 292 ntBASIC6.82□□□□□ -1.32
USP11P51784 AL121835.1-201ENST00000404250 354 ntBASIC6.82□□□□□ -1.32
USP11P51784 OR2W4P-201ENST00000406496 926 ntBASIC6.82□□□□□ -1.32
USP11P51784 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms