Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 RPL37P3-201ENST00000456825 293 ntBASIC4.71□□□□□ -1.65
BRCA2P51587 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.71□□□□□ -1.65
BRCA2P51587 RNU1-95P-201ENST00000516357 160 ntBASIC4.71□□□□□ -1.65
BRCA2P51587 RNU1-128P-201ENST00000516704 160 ntBASIC4.71□□□□□ -1.65
BRCA2P51587 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.71□□□□□ -1.65
BRCA2P51587 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.71□□□□□ -1.65
BRCA2P51587 AC005255.1-201ENST00000593748 216 ntBASIC4.71□□□□□ -1.65
BRCA2P51587 AC011816.2-201ENST00000607089 556 ntBASIC4.71□□□□□ -1.65
BRCA2P51587 AC006065.6-201ENST00000625201 545 ntBASIC4.71□□□□□ -1.65
BRCA2P51587 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC4.71□□□□□ -1.66
BRCA2P51587 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.71□□□□□ -1.66
BRCA2P51587 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
BRCA2P51587 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
BRCA2P51587 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
BRCA2P51587 RNA5SP307-201ENST00000362863 116 ntBASIC4.71□□□□□ -1.66
BRCA2P51587 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.71□□□□□ -1.66
BRCA2P51587 RN7SKP67-201ENST00000515905 235 ntBASIC4.71□□□□□ -1.66
BRCA2P51587 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.71□□□□□ -1.66
BRCA2P51587 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.71□□□□□ -1.66
BRCA2P51587 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.71□□□□□ -1.66
BRCA2P51587 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
BRCA2P51587 ADAD1P2-201ENST00000588476 646 ntBASIC4.71□□□□□ -1.66
BRCA2P51587 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
BRCA2P51587 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
BRCA2P51587 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.71□□□□□ -1.66
BRCA2P51587 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
BRCA2P51587 AC104306.1-201ENST00000449702 371 ntBASIC4.71□□□□□ -1.66
BRCA2P51587 MTND6P6-201ENST00000478031 263 ntBASIC4.71□□□□□ -1.66
BRCA2P51587 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.71□□□□□ -1.66
BRCA2P51587 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.71□□□□□ -1.66
BRCA2P51587 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.71□□□□□ -1.66
BRCA2P51587 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.71□□□□□ -1.66
BRCA2P51587 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
BRCA2P51587 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC4.7□□□□□ -1.66
BRCA2P51587 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC4.7□□□□□ -1.66
BRCA2P51587 SNORA70.6-201ENST00000383934 134 ntBASIC4.7□□□□□ -1.66
BRCA2P51587 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.7□□□□□ -1.66
BRCA2P51587 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.7□□□□□ -1.66
BRCA2P51587 RN7SL197P-201ENST00000466981 299 ntBASIC4.7□□□□□ -1.66
BRCA2P51587 WBP1LP4-201ENST00000505043 344 ntBASIC4.7□□□□□ -1.66
BRCA2P51587 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.7□□□□□ -1.66
BRCA2P51587 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BRCA2P51587 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
BRCA2P51587 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRCA2P51587 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.7□□□□□ -1.66
BRCA2P51587 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.7□□□□□ -1.66
BRCA2P51587 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRCA2P51587 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRCA2P51587 AC021242.1-201ENST00000507315 2035 ntBASIC4.7□□□□□ -1.66
BRCA2P51587 BIVM-ERCC5-201ENST00000602836 5143 ntAPPRIS P5 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRCA2P51587 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
BRCA2P51587 AC027228.2-201ENST00000567141 2154 ntBASIC4.7□□□□□ -1.66
BRCA2P51587 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
BRCA2P51587 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
BRCA2P51587 AL445487.1-201ENST00000415694 1580 ntBASIC4.7□□□□□ -1.66
BRCA2P51587 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
BRCA2P51587 RNU1-63P-201ENST00000383902 164 ntBASIC4.7□□□□□ -1.66
BRCA2P51587 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.7□□□□□ -1.66
BRCA2P51587 AL451050.1-201ENST00000450126 415 ntBASIC4.7□□□□□ -1.66
BRCA2P51587 RPS27AP17-201ENST00000463344 455 ntBASIC4.7□□□□□ -1.66
BRCA2P51587 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.7□□□□□ -1.66
BRCA2P51587 AC016957.2-201ENST00000616998 848 ntBASIC4.7□□□□□ -1.66
BRCA2P51587 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BRCA2P51587 AL133243.3-201ENST00000617415 3004 ntBASIC4.7□□□□□ -1.66
BRCA2P51587 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.7□□□□□ -1.66
BRCA2P51587 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.69□□□□□ -1.66
BRCA2P51587 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.69□□□□□ -1.66
BRCA2P51587 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRCA2P51587 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
BRCA2P51587 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.69□□□□□ -1.66
BRCA2P51587 AC006994.1-201ENST00000438212 839 ntBASIC4.69□□□□□ -1.66
BRCA2P51587 AC023271.1-201ENST00000445936 1090 ntBASIC4.69□□□□□ -1.66
BRCA2P51587 RPL35AP15-201ENST00000468042 339 ntBASIC4.69□□□□□ -1.66
BRCA2P51587 AC004069.2-201ENST00000505438 1114 ntBASIC4.69□□□□□ -1.66
BRCA2P51587 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.69□□□□□ -1.66
BRCA2P51587 AC027455.1-201ENST00000574104 594 ntBASIC4.69□□□□□ -1.66
BRCA2P51587 AL031985.2-201ENST00000600955 480 ntBASIC4.69□□□□□ -1.66
BRCA2P51587 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.69□□□□□ -1.66
BRCA2P51587 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC4.69□□□□□ -1.66
BRCA2P51587 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRCA2P51587 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.69□□□□□ -1.66
BRCA2P51587 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
BRCA2P51587 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRCA2P51587 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.69□□□□□ -1.66
BRCA2P51587 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRCA2P51587 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRCA2P51587 RNU4-6P-201ENST00000410804 122 ntBASIC4.69□□□□□ -1.66
BRCA2P51587 MIR5684-201ENST00000585074 65 ntBASIC4.69□□□□□ -1.66
BRCA2P51587 AC025857.2-201ENST00000602711 238 ntBASIC4.69□□□□□ -1.66
BRCA2P51587 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.69□□□□□ -1.66
BRCA2P51587 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
BRCA2P51587 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRCA2P51587 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRCA2P51587 AC100778.3-201ENST00000580060 1750 ntBASIC4.69□□□□□ -1.66
BRCA2P51587 RPL23AP81-201ENST00000455252 467 ntBASIC4.69□□□□□ -1.66
BRCA2P51587 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.69□□□□□ -1.66
BRCA2P51587 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.69□□□□□ -1.66
BRCA2P51587 Z95327.3-201ENST00000610385 572 ntBASIC4.69□□□□□ -1.66
BRCA2P51587 JPX-212ENST00000639185 9658 ntTSL 5 BASIC4.69□□□□□ -1.66
BRCA2P51587 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms