Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 RPS17P5-201ENST00000498293 408 ntBASIC5.36□□□□□ -1.55
RXRGP48443 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RXRGP48443 NDUFB5P1-201ENST00000508134 564 ntBASIC5.36□□□□□ -1.55
RXRGP48443 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.36□□□□□ -1.55
RXRGP48443 RN7SKP253-201ENST00000516424 309 ntBASIC5.36□□□□□ -1.55
RXRGP48443 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.36□□□□□ -1.55
RXRGP48443 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.36□□□□□ -1.55
RXRGP48443 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.36□□□□□ -1.55
RXRGP48443 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.36□□□□□ -1.55
RXRGP48443 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.36□□□□□ -1.55
RXRGP48443 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RXRGP48443 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.36□□□□□ -1.55
RXRGP48443 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.36□□□□□ -1.55
RXRGP48443 AC068446.3-201ENST00000555285 382 ntBASIC5.36□□□□□ -1.55
RXRGP48443 ATP5F1P7-201ENST00000567330 760 ntBASIC5.36□□□□□ -1.55
RXRGP48443 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.36□□□□□ -1.55
RXRGP48443 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.36□□□□□ -1.55
RXRGP48443 RBM22P1-201ENST00000578589 1214 ntBASIC5.36□□□□□ -1.55
RXRGP48443 AC011477.5-201ENST00000586571 259 ntBASIC5.36□□□□□ -1.55
RXRGP48443 AC095055.1-201ENST00000603472 1113 ntBASIC5.36□□□□□ -1.55
RXRGP48443 BNIP3P19-201ENST00000605397 577 ntBASIC5.36□□□□□ -1.55
RXRGP48443 OR2BH1P-201ENST00000608850 864 ntBASIC5.36□□□□□ -1.55
RXRGP48443 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.36□□□□□ -1.55
RXRGP48443 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RXRGP48443 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RXRGP48443 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.36□□□□□ -1.55
RXRGP48443 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.36□□□□□ -1.55
RXRGP48443 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RXRGP48443 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RXRGP48443 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RXRGP48443 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RXRGP48443 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RXRGP48443 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.35□□□□□ -1.55
RXRGP48443 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.35□□□□□ -1.55
RXRGP48443 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RXRGP48443 CYP1D1P-201ENST00000416662 1433 ntBASIC5.35□□□□□ -1.55
RXRGP48443 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RXRGP48443 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.35□□□□□ -1.55
RXRGP48443 PCAT14-202ENST00000627127 3935 ntBASIC5.35□□□□□ -1.55
RXRGP48443 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RXRGP48443 AL121886.1-201ENST00000358609 435 ntBASIC5.35□□□□□ -1.55
RXRGP48443 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RXRGP48443 SNORA16A-201ENST00000384342 137 ntBASIC5.35□□□□□ -1.55
RXRGP48443 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
RXRGP48443 DUTP5-201ENST00000406790 469 ntBASIC5.35□□□□□ -1.55
RXRGP48443 RNA5SP487-201ENST00000410186 122 ntBASIC5.35□□□□□ -1.55
RXRGP48443 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.35□□□□□ -1.55
RXRGP48443 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RXRGP48443 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.35□□□□□ -1.55
RXRGP48443 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RXRGP48443 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.35□□□□□ -1.55
RXRGP48443 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.35□□□□□ -1.55
RXRGP48443 PSMD10P3-201ENST00000437000 448 ntBASIC5.35□□□□□ -1.55
RXRGP48443 AP000949.1-201ENST00000438328 629 ntBASIC5.35□□□□□ -1.55
RXRGP48443 ACTR3P2-201ENST00000439585 1257 ntBASIC5.35□□□□□ -1.55
RXRGP48443 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.35□□□□□ -1.55
RXRGP48443 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.35□□□□□ -1.55
RXRGP48443 AC073850.1-201ENST00000449243 255 ntBASIC5.35□□□□□ -1.55
RXRGP48443 RPL32P14-201ENST00000463196 378 ntBASIC5.35□□□□□ -1.55
RXRGP48443 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.35□□□□□ -1.55
RXRGP48443 PPM1AP1-201ENST00000502740 1135 ntBASIC5.35□□□□□ -1.55
RXRGP48443 OR5H3P-201ENST00000502817 919 ntBASIC5.35□□□□□ -1.55
RXRGP48443 AC106806.2-201ENST00000509365 500 ntBASIC5.35□□□□□ -1.55
RXRGP48443 AC121161.1-201ENST00000510606 652 ntBASIC5.35□□□□□ -1.55
RXRGP48443 MTND6P2-201ENST00000512226 524 ntBASIC5.35□□□□□ -1.55
RXRGP48443 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.35□□□□□ -1.55
RXRGP48443 AC010306.1-201ENST00000523223 1117 ntBASIC5.35□□□□□ -1.55
RXRGP48443 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.35□□□□□ -1.55
RXRGP48443 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.35□□□□□ -1.55
RXRGP48443 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.35□□□□□ -1.55
RXRGP48443 AC090312.1-201ENST00000580637 348 ntBASIC5.35□□□□□ -1.55
RXRGP48443 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.35□□□□□ -1.55
RXRGP48443 AP005262.1-201ENST00000582646 997 ntBASIC5.35□□□□□ -1.55
RXRGP48443 AC012254.4-201ENST00000588843 273 ntBASIC5.35□□□□□ -1.55
RXRGP48443 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.35□□□□□ -1.55
RXRGP48443 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.35□□□□□ -1.55
RXRGP48443 AC023509.5-201ENST00000617434 807 ntBASIC5.35□□□□□ -1.55
RXRGP48443 AC016717.3-201ENST00000624730 554 ntBASIC5.35□□□□□ -1.55
RXRGP48443 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.35□□□□□ -1.55
RXRGP48443 ATE1-AS1-202ENST00000636460 506 ntBASIC5.35□□□□□ -1.55
RXRGP48443 AL590396.2-201ENST00000636511 1041 ntBASIC5.35□□□□□ -1.55
RXRGP48443 LINC01739-205ENST00000641890 573 ntBASIC5.35□□□□□ -1.55
RXRGP48443 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RXRGP48443 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RXRGP48443 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RXRGP48443 OR55B1P-203ENST00000641518 2602 ntBASIC5.35□□□□□ -1.55
RXRGP48443 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.35□□□□□ -1.55
RXRGP48443 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RXRGP48443 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RXRGP48443 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RXRGP48443 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RXRGP48443 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RXRGP48443 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.34□□□□□ -1.55
RXRGP48443 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RXRGP48443 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
RXRGP48443 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RXRGP48443 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.34□□□□□ -1.55
RXRGP48443 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RXRGP48443 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RXRGP48443 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms