Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC008015.1-201ENST00000555505 465 ntBASIC4.84□□□□□ -1.63
SOX2P48431 AC007956.1-201ENST00000555623 542 ntBASIC4.84□□□□□ -1.63
SOX2P48431 AC121758.1-202ENST00000556917 658 ntBASIC4.84□□□□□ -1.63
SOX2P48431 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.84□□□□□ -1.63
SOX2P48431 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.84□□□□□ -1.63
SOX2P48431 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.84□□□□□ -1.63
SOX2P48431 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.84□□□□□ -1.63
SOX2P48431 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.84□□□□□ -1.63
SOX2P48431 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.84□□□□□ -1.63
SOX2P48431 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.84□□□□□ -1.63
SOX2P48431 AC011500.1-201ENST00000601963 469 ntBASIC4.84□□□□□ -1.63
SOX2P48431 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.84□□□□□ -1.63
SOX2P48431 AC108738.1-201ENST00000603703 237 ntBASIC4.84□□□□□ -1.63
SOX2P48431 AL358072.1-201ENST00000604156 575 ntBASIC4.84□□□□□ -1.63
SOX2P48431 AC245008.1-201ENST00000608123 476 ntBASIC4.84□□□□□ -1.63
SOX2P48431 AC105227.2-201ENST00000615075 605 ntBASIC4.84□□□□□ -1.63
SOX2P48431 AL157770.1-201ENST00000623049 439 ntBASIC4.84□□□□□ -1.63
SOX2P48431 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.84□□□□□ -1.63
SOX2P48431 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.84□□□□□ -1.63
SOX2P48431 MFSD8-245ENST00000641743 948 ntBASIC4.84□□□□□ -1.63
SOX2P48431 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SOX2P48431 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
SOX2P48431 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.84□□□□□ -1.63
SOX2P48431 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SOX2P48431 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SOX2P48431 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SOX2P48431 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.84□□□□□ -1.64
SOX2P48431 CASC19-284ENST00000642142 1868 ntBASIC4.83□□□□□ -1.64
SOX2P48431 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SOX2P48431 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SOX2P48431 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SOX2P48431 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.83□□□□□ -1.64
SOX2P48431 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SOX2P48431 RLIMP2-201ENST00000427891 1563 ntBASIC4.83□□□□□ -1.64
SOX2P48431 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SOX2P48431 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.83□□□□□ -1.64
SOX2P48431 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SOX2P48431 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.83□□□□□ -1.64
SOX2P48431 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SOX2P48431 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.83□□□□□ -1.64
SOX2P48431 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.83□□□□□ -1.64
SOX2P48431 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX2P48431 RN7SKP81-201ENST00000365603 331 ntBASIC4.83□□□□□ -1.64
SOX2P48431 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
SOX2P48431 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SOX2P48431 RNU4-72P-201ENST00000410754 173 ntBASIC4.83□□□□□ -1.64
SOX2P48431 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.83□□□□□ -1.64
SOX2P48431 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.83□□□□□ -1.64
SOX2P48431 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SOX2P48431 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.83□□□□□ -1.64
SOX2P48431 MORF4L1P6-201ENST00000418771 268 ntBASIC4.83□□□□□ -1.64
SOX2P48431 RPL7P53-201ENST00000421245 739 ntBASIC4.83□□□□□ -1.64
SOX2P48431 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX2P48431 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SOX2P48431 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.83□□□□□ -1.64
SOX2P48431 HMGB1P45-201ENST00000435986 653 ntBASIC4.83□□□□□ -1.64
SOX2P48431 RPS26P30-201ENST00000443431 335 ntBASIC4.83□□□□□ -1.64
SOX2P48431 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4.83□□□□□ -1.64
SOX2P48431 MTND1P29-201ENST00000448112 647 ntBASIC4.83□□□□□ -1.64
SOX2P48431 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX2P48431 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX2P48431 TRBV8-2-201ENST00000475637 270 ntBASIC4.83□□□□□ -1.64
SOX2P48431 RN7SL583P-201ENST00000475692 287 ntBASIC4.83□□□□□ -1.64
SOX2P48431 AC044810.1-201ENST00000480271 711 ntBASIC4.83□□□□□ -1.64
SOX2P48431 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX2P48431 IGBP1P4-201ENST00000503202 879 ntBASIC4.83□□□□□ -1.64
SOX2P48431 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX2P48431 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.83□□□□□ -1.64
SOX2P48431 OR5H4P-201ENST00000510851 923 ntBASIC4.83□□□□□ -1.64
SOX2P48431 AC109464.1-201ENST00000511091 819 ntBASIC4.83□□□□□ -1.64
SOX2P48431 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX2P48431 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX2P48431 AC092709.1-201ENST00000521355 1045 ntBASIC4.83□□□□□ -1.64
SOX2P48431 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.83□□□□□ -1.64
SOX2P48431 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.83□□□□□ -1.64
SOX2P48431 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.83□□□□□ -1.64
SOX2P48431 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.83□□□□□ -1.64
SOX2P48431 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX2P48431 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.83□□□□□ -1.64
SOX2P48431 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.83□□□□□ -1.64
SOX2P48431 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX2P48431 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.83□□□□□ -1.64
SOX2P48431 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX2P48431 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SOX2P48431 H3F3BP2-201ENST00000583907 357 ntBASIC4.83□□□□□ -1.64
SOX2P48431 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.83□□□□□ -1.64
SOX2P48431 AC110760.3-201ENST00000598794 467 ntBASIC4.83□□□□□ -1.64
SOX2P48431 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.83□□□□□ -1.64
SOX2P48431 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX2P48431 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX2P48431 AL450489.1-201ENST00000612071 468 ntBASIC4.83□□□□□ -1.64
SOX2P48431 AC107075.1-201ENST00000613695 314 ntBASIC4.83□□□□□ -1.64
SOX2P48431 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX2P48431 AC074140.1-201ENST00000621617 208 ntBASIC4.83□□□□□ -1.64
SOX2P48431 AP003497.2-201ENST00000624220 967 ntBASIC4.83□□□□□ -1.64
SOX2P48431 AC111152.1-202ENST00000635848 339 ntBASIC4.83□□□□□ -1.64
SOX2P48431 AC103706.2-201ENST00000638080 240 ntBASIC4.83□□□□□ -1.64
SOX2P48431 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.83□□□□□ -1.64
SOX2P48431 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SOX2P48431 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms