Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC8.28□□□□□ -1.08
PTPREP23469 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC8.28□□□□□ -1.08
PTPREP23469 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC8.28□□□□□ -1.08
PTPREP23469 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC8.28□□□□□ -1.08
PTPREP23469 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC8.28□□□□□ -1.08
PTPREP23469 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC8.28□□□□□ -1.08
PTPREP23469 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC8.28□□□□□ -1.08
PTPREP23469 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC8.28□□□□□ -1.08
PTPREP23469 RN7SL667P-201ENST00000582817 298 ntBASIC8.28□□□□□ -1.08
PTPREP23469 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC8.28□□□□□ -1.08
PTPREP23469 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC8.28□□□□□ -1.08
PTPREP23469 MIR6849-201ENST00000618543 69 ntBASIC8.28□□□□□ -1.08
PTPREP23469 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC8.28□□□□□ -1.08
PTPREP23469 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
PTPREP23469 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC8.28□□□□□ -1.08
PTPREP23469 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC8.28□□□□□ -1.08
PTPREP23469 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC8.28□□□□□ -1.08
PTPREP23469 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC8.28□□□□□ -1.08
PTPREP23469 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC8.28□□□□□ -1.08
PTPREP23469 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
PTPREP23469 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PTPREP23469 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC8.28□□□□□ -1.08
PTPREP23469 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.28□□□□□ -1.08
PTPREP23469 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC8.28□□□□□ -1.08
PTPREP23469 AC079777.1-201ENST00000623836 1953 ntBASIC8.28□□□□□ -1.08
PTPREP23469 AP003119.3-201ENST00000566747 4192 ntBASIC8.28□□□□□ -1.08
PTPREP23469 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PTPREP23469 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
PTPREP23469 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
PTPREP23469 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
PTPREP23469 AL359922.2-201ENST00000581788 3017 ntBASIC8.27□□□□□ -1.08
PTPREP23469 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PTPREP23469 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PTPREP23469 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC8.27□□□□□ -1.09
PTPREP23469 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC8.27□□□□□ -1.09
PTPREP23469 AL359091.1-201ENST00000449048 1734 ntBASIC8.27□□□□□ -1.09
PTPREP23469 HCG18-244ENST00000602516 2890 ntBASIC8.27□□□□□ -1.09
PTPREP23469 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
PTPREP23469 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC8.27□□□□□ -1.09
PTPREP23469 RN7SKP55-201ENST00000364888 307 ntBASIC8.27□□□□□ -1.09
PTPREP23469 Y_RNA.527-201ENST00000384573 102 ntBASIC8.27□□□□□ -1.09
PTPREP23469 Y_RNA.556-201ENST00000384677 113 ntBASIC8.27□□□□□ -1.09
PTPREP23469 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC8.27□□□□□ -1.09
PTPREP23469 RPL18AP14-201ENST00000417685 526 ntBASIC8.27□□□□□ -1.09
PTPREP23469 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC8.27□□□□□ -1.09
PTPREP23469 AC023347.2-201ENST00000433994 462 ntBASIC8.27□□□□□ -1.09
PTPREP23469 RPL23AP50-201ENST00000434149 455 ntBASIC8.27□□□□□ -1.09
PTPREP23469 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PTPREP23469 HSPE1P22-201ENST00000456856 327 ntBASIC8.27□□□□□ -1.09
PTPREP23469 MEMO1P3-201ENST00000459811 302 ntBASIC8.27□□□□□ -1.09
PTPREP23469 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
PTPREP23469 AC233702.1-201ENST00000482905 502 ntBASIC8.27□□□□□ -1.09
PTPREP23469 AL591122.1-201ENST00000487348 492 ntBASIC8.27□□□□□ -1.09
PTPREP23469 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PTPREP23469 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC8.27□□□□□ -1.09
PTPREP23469 AC027801.3-201ENST00000515049 698 ntBASIC8.27□□□□□ -1.09
PTPREP23469 RNU6-583P-201ENST00000516012 92 ntBASIC8.27□□□□□ -1.09
PTPREP23469 AC105031.1-201ENST00000518550 476 ntBASIC8.27□□□□□ -1.09
PTPREP23469 RANP9-201ENST00000519957 271 ntBASIC8.27□□□□□ -1.09
PTPREP23469 RGS5-220ENST00000528689 566 ntTSL 5 BASIC8.27□□□□□ -1.09
PTPREP23469 BNIP3P6-201ENST00000549284 499 ntBASIC8.27□□□□□ -1.09
PTPREP23469 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC8.27□□□□□ -1.09
PTPREP23469 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC8.27□□□□□ -1.09
PTPREP23469 HNRNPA1P71-201ENST00000559135 950 ntBASIC8.27□□□□□ -1.09
PTPREP23469 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC8.27□□□□□ -1.09
PTPREP23469 EEF1B2P1-201ENST00000567221 672 ntBASIC8.27□□□□□ -1.09
PTPREP23469 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC8.27□□□□□ -1.09
PTPREP23469 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC8.27□□□□□ -1.09
PTPREP23469 MIR4428-201ENST00000584884 73 ntBASIC8.27□□□□□ -1.09
PTPREP23469 AC015801.1-201ENST00000585651 153 ntBASIC8.27□□□□□ -1.09
PTPREP23469 RNU6-87P-201ENST00000607561 108 ntBASIC8.27□□□□□ -1.09
PTPREP23469 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC8.27□□□□□ -1.09
PTPREP23469 AC211486.4-201ENST00000621495 113 ntBASIC8.27□□□□□ -1.09
PTPREP23469 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC8.27□□□□□ -1.09
PTPREP23469 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC8.27□□□□□ -1.09
PTPREP23469 OR2L1P-202ENST00000641567 1023 ntBASIC8.27□□□□□ -1.09
PTPREP23469 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PTPREP23469 AC032011.1-201ENST00000611703 1549 ntBASIC8.27□□□□□ -1.09
PTPREP23469 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC8.27□□□□□ -1.09
PTPREP23469 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC8.27□□□□□ -1.09
PTPREP23469 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PTPREP23469 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PTPREP23469 CAST-222ENST00000508579 1758 ntTSL 2 BASIC8.27□□□□□ -1.09
PTPREP23469 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PTPREP23469 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC8.27□□□□□ -1.09
PTPREP23469 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PTPREP23469 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC8.27□□□□□ -1.09
PTPREP23469 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC8.27□□□□□ -1.09
PTPREP23469 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
PTPREP23469 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
PTPREP23469 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
PTPREP23469 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC8.26□□□□□ -1.09
PTPREP23469 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
PTPREP23469 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
PTPREP23469 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
PTPREP23469 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC8.26□□□□□ -1.09
PTPREP23469 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PTPREP23469 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
PTPREP23469 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.26□□□□□ -1.09
PTPREP23469 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms