Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 DDX6P1-205ENST00000441966 1436 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 MAPK10-304ENST00000641341 3984 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AC105402.1-201ENST00000413336 545 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 RANP4-201ENST00000413361 655 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 GJA6P-201ENST00000415117 1042 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AC007394.1-201ENST00000421941 531 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 MTND2P21-201ENST00000436242 1042 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AC073052.1-201ENST00000440417 714 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 BTF3P6-201ENST00000448054 499 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 HMGB1P26-201ENST00000452520 628 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 MTND3P4-201ENST00000453537 303 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 RN7SL329P-201ENST00000467740 299 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 RN7SL319P-201ENST00000480656 221 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 RN7SL97P-201ENST00000486780 299 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AC004453.1-201ENST00000487895 408 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 Y_RNA.719-201ENST00000517156 106 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AL049830.4-201ENST00000555149 351 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AC068446.3-201ENST00000555285 382 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AC110743.1-201ENST00000584870 478 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 MEMO1P5-201ENST00000604810 406 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AC055764.2-201ENST00000610089 670 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 EIF3FP1-201ENST00000613970 806 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AC009704.2-201ENST00000618739 483 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AL353662.3-201ENST00000625131 237 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AC096656.1-201ENST00000623826 1364 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 AC093311.1-201ENST00000506586 2021 ntBASIC4.99□□□□□ -1.61
HLA-DPA1P20036 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DPA1P20036 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 RNU4-39P-201ENST00000362455 127 ntBASIC4.98□□□□□ -1.61
HLA-DPA1P20036 RNU4-4P-201ENST00000364588 130 ntBASIC4.98□□□□□ -1.61
HLA-DPA1P20036 AL645733.1-201ENST00000402250 217 ntBASIC4.98□□□□□ -1.61
HLA-DPA1P20036 AP002530.1-201ENST00000405705 684 ntBASIC4.98□□□□□ -1.61
HLA-DPA1P20036 AC073136.2-201ENST00000417282 849 ntBASIC4.98□□□□□ -1.61
HLA-DPA1P20036 AF186996.5-201ENST00000418098 904 ntBASIC4.98□□□□□ -1.61
HLA-DPA1P20036 AC092570.3-201ENST00000420113 693 ntBASIC4.98□□□□□ -1.61
HLA-DPA1P20036 AC009965.2-201ENST00000425328 970 ntBASIC4.98□□□□□ -1.61
HLA-DPA1P20036 AC092162.1-201ENST00000432828 434 ntBASIC4.98□□□□□ -1.61
HLA-DPA1P20036 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.98□□□□□ -1.61
HLA-DPA1P20036 MTND6P6-201ENST00000478031 263 ntBASIC4.98□□□□□ -1.61
HLA-DPA1P20036 HMGB3P14-201ENST00000494195 599 ntBASIC4.98□□□□□ -1.61
HLA-DPA1P20036 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 PGBD4P4-201ENST00000509673 613 ntBASIC4.98□□□□□ -1.61
HLA-DPA1P20036 ENPP7P9-201ENST00000514456 627 ntBASIC4.98□□□□□ -1.61
HLA-DPA1P20036 IGKV2D-10-201ENST00000520194 281 ntBASIC4.98□□□□□ -1.61
HLA-DPA1P20036 AP006245.2-201ENST00000522004 300 ntBASIC4.98□□□□□ -1.61
HLA-DPA1P20036 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 AC005229.3-201ENST00000603438 323 ntBASIC4.98□□□□□ -1.61
HLA-DPA1P20036 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 AC131238.1-201ENST00000617135 328 ntBASIC4.98□□□□□ -1.61
HLA-DPA1P20036 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DPA1P20036 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HLA-DPA1P20036 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms