Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
NFKB1P19838 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NFKB1P19838 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NFKB1P19838 AC009220.2-201ENST00000489759 1751 ntBASIC6.74□□□□□ -1.33
NFKB1P19838 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.74□□□□□ -1.33
NFKB1P19838 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.74□□□□□ -1.33
NFKB1P19838 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NFKB1P19838 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NFKB1P19838 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NFKB1P19838 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NFKB1P19838 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NFKB1P19838 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
NFKB1P19838 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
NFKB1P19838 NAMPTP1-201ENST00000440465 2514 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 CASC19-260ENST00000641828 2001 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
NFKB1P19838 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
NFKB1P19838 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
NFKB1P19838 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
NFKB1P19838 RNU6-767P-201ENST00000384132 107 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
NFKB1P19838 AL049693.1-201ENST00000402760 611 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 RPS7P8-201ENST00000418311 581 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 AL953862.1-201ENST00000423016 168 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 OR52B5P-201ENST00000435337 951 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 PCBP2P1-201ENST00000437262 977 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 AC079448.1-201ENST00000449377 373 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC6.73□□□□□ -1.33
NFKB1P19838 AL590365.1-201ENST00000450788 243 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 OR52E7P-201ENST00000452394 933 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.73□□□□□ -1.33
NFKB1P19838 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.73□□□□□ -1.33
NFKB1P19838 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
NFKB1P19838 RPL23AP64-201ENST00000469465 435 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 AC099340.1-201ENST00000475247 599 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 AC073610.1-201ENST00000489971 396 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 OR51A1P-201ENST00000511110 946 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 RNU6-1261P-201ENST00000517194 104 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC6.73□□□□□ -1.33
NFKB1P19838 AP003122.4-201ENST00000530980 758 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.73□□□□□ -1.33
NFKB1P19838 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC6.73□□□□□ -1.33
NFKB1P19838 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.73□□□□□ -1.33
NFKB1P19838 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.73□□□□□ -1.33
NFKB1P19838 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.73□□□□□ -1.33
NFKB1P19838 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.73□□□□□ -1.33
NFKB1P19838 AC107954.1-201ENST00000565906 727 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC6.73□□□□□ -1.33
NFKB1P19838 AP003115.1-201ENST00000569849 463 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.73□□□□□ -1.33
NFKB1P19838 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.73□□□□□ -1.33
NFKB1P19838 AC091133.5-201ENST00000603088 301 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 CYCSP1-201ENST00000604815 315 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 AC018695.5-201ENST00000605872 315 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 AC103710.4-201ENST00000609301 899 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NFKB1P19838 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
NFKB1P19838 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
NFKB1P19838 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NFKB1P19838 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
NFKB1P19838 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
NFKB1P19838 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
NFKB1P19838 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
NFKB1P19838 AC005618.1-201ENST00000606901 3148 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.73□□□□□ -1.33
NFKB1P19838 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
NFKB1P19838 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NFKB1P19838 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.73□□□□□ -1.33
NFKB1P19838 AC007406.5-201ENST00000570140 3170 ntBASIC6.73□□□□□ -1.33
NFKB1P19838 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NFKB1P19838 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.73□□□□□ -1.33
NFKB1P19838 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.72□□□□□ -1.33
NFKB1P19838 AP002370.1-201ENST00000528055 1602 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.72□□□□□ -1.33
NFKB1P19838 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.72□□□□□ -1.33
NFKB1P19838 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NFKB1P19838 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NFKB1P19838 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC6.72□□□□□ -1.33
NFKB1P19838 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.72□□□□□ -1.33
NFKB1P19838 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
NFKB1P19838 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
NFKB1P19838 RNU6-845P-201ENST00000362578 103 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 ZNF37CP-201ENST00000406795 241 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 JKAMPP1-201ENST00000413804 919 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 VN1R36P-201ENST00000414936 291 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 TMBIM7P-201ENST00000418074 855 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 AC013429.2-201ENST00000418798 781 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 AC083875.1-201ENST00000419509 405 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.72□□□□□ -1.33
NFKB1P19838 SDCBPP2-201ENST00000424643 885 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 AC073335.1-201ENST00000427776 363 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 SAR1AP4-201ENST00000429225 591 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 RPL7P56-201ENST00000429441 717 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 FCF1P1-201ENST00000432690 571 ntBASIC6.72□□□□□ -1.33
NFKB1P19838 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.72□□□□□ -1.33
NFKB1P19838 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC6.72□□□□□ -1.33
NFKB1P19838 HMGB3P9-201ENST00000441799 583 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms