Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
XRCC1P18887 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
XRCC1P18887 NCLP2-201ENST00000416078 1462 ntBASIC4.74□□□□□ -1.65
XRCC1P18887 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
XRCC1P18887 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
XRCC1P18887 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.73□□□□□ -1.65
XRCC1P18887 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
XRCC1P18887 UGT2B26P-201ENST00000508672 1613 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.73□□□□□ -1.65
XRCC1P18887 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
XRCC1P18887 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.73□□□□□ -1.65
XRCC1P18887 AL590139.1-201ENST00000416267 400 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
XRCC1P18887 RPS26P2-201ENST00000440331 348 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.73□□□□□ -1.65
XRCC1P18887 TDGF1P1-201ENST00000445734 527 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.73□□□□□ -1.65
XRCC1P18887 RPL7L1P1-201ENST00000448259 785 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.73□□□□□ -1.65
XRCC1P18887 AL513533.1-201ENST00000453728 415 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.73□□□□□ -1.65
XRCC1P18887 RPL21P6-201ENST00000479171 504 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 IGLV2-34-201ENST00000490007 283 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 AC011005.3-201ENST00000491624 395 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.73□□□□□ -1.65
XRCC1P18887 RN7SKP276-201ENST00000516242 268 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 AC026688.1-201ENST00000520639 1168 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 AP001880.2-201ENST00000538233 448 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
XRCC1P18887 AC027281.1-201ENST00000574178 758 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.73□□□□□ -1.65
XRCC1P18887 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.73□□□□□ -1.65
XRCC1P18887 AC087283.1-201ENST00000604029 1074 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.73□□□□□ -1.65
XRCC1P18887 AL136295.6-201ENST00000610486 658 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 AL161616.1-201ENST00000611867 286 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
XRCC1P18887 AC005086.4-201ENST00000623065 213 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.73□□□□□ -1.65
XRCC1P18887 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.73□□□□□ -1.65
XRCC1P18887 SMG1P6-201ENST00000532337 2930 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
XRCC1P18887 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
XRCC1P18887 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
XRCC1P18887 AL606537.1-201ENST00000607258 2011 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
XRCC1P18887 AL034370.1-201ENST00000397254 1590 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
XRCC1P18887 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
XRCC1P18887 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
XRCC1P18887 DDX18P4-201ENST00000511690 1966 ntBASIC4.73□□□□□ -1.65
XRCC1P18887 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
XRCC1P18887 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
XRCC1P18887 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
XRCC1P18887 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
XRCC1P18887 OR51C1P-202ENST00000641159 1444 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 AC000123.3-201ENST00000624029 4975 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
XRCC1P18887 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
XRCC1P18887 AP000542.2-201ENST00000623199 6179 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.72□□□□□ -1.65
XRCC1P18887 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.72□□□□□ -1.65
XRCC1P18887 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
XRCC1P18887 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
XRCC1P18887 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
XRCC1P18887 RNU6-670P-201ENST00000364312 104 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 RNU2-50P-201ENST00000410494 143 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.72□□□□□ -1.65
XRCC1P18887 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.72□□□□□ -1.65
XRCC1P18887 AC004074.1-201ENST00000421810 1063 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 Z85994.2-201ENST00000434327 452 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.72□□□□□ -1.65
XRCC1P18887 MRPL48P1-201ENST00000445390 636 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.72□□□□□ -1.65
XRCC1P18887 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.72□□□□□ -1.65
XRCC1P18887 AC006967.1-201ENST00000467608 589 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 RPL23AP37-201ENST00000479658 549 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
XRCC1P18887 HMGB3P14-201ENST00000494195 599 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 RPS4XP18-201ENST00000495480 763 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 ATG10-AS1-201ENST00000504846 648 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 AC021146.3-201ENST00000511911 260 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.72□□□□□ -1.65
XRCC1P18887 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.72□□□□□ -1.65
XRCC1P18887 AC087477.6-201ENST00000559595 843 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 MTND2P13-201ENST00000577438 1039 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 SNORA74C-1-201ENST00000580726 201 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 RN7SL52P-201ENST00000584271 284 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 AC022726.1-201ENST00000587475 207 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 AC124856.1-201ENST00000600819 896 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 AL121932.1-201ENST00000605542 214 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 AL592494.3-201ENST00000609485 464 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 MIR6820-201ENST00000611508 62 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 AC015922.4-201ENST00000612568 690 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 MIR6780A-201ENST00000615089 68 ntBASIC4.72□□□□□ -1.65
XRCC1P18887 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.72□□□□□ -1.65
XRCC1P18887 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.72□□□□□ -1.65
XRCC1P18887 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.72□□□□□ -1.65
XRCC1P18887 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.72□□□□□ -1.65
XRCC1P18887 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms