Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC022795.1-201ENST00000473808 480 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 AC016687.1-201ENST00000482574 353 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXC4P09017 AC020890.1-201ENST00000491837 504 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HOXC4P09017 AC098799.3-201ENST00000506095 438 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.57□□□□□ -1.68
HOXC4P09017 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXC4P09017 AC034205.1-201ENST00000520621 638 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXC4P09017 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXC4P09017 AC087477.6-201ENST00000559595 843 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXC4P09017 AC018552.1-201ENST00000562099 811 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 AC008782.1-201ENST00000603386 430 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 AC115286.1-201ENST00000604298 434 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 AL356218.2-201ENST00000605264 187 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXC4P09017 AC022960.2-201ENST00000616300 666 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 AC074140.1-201ENST00000621617 208 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 AP003400.2-201ENST00000624036 666 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 AL596275.2-204ENST00000641628 552 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 AL596275.2-206ENST00000641957 626 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HOXC4P09017 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXC4P09017 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXC4P09017 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HOXC4P09017 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HOXC4P09017 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXC4P09017 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXC4P09017 MFSD8-242ENST00000641690 4199 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC4P09017 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HOXC4P09017 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXC4P09017 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC4P09017 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC4P09017 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC4P09017 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HOXC4P09017 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXC4P09017 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HOXC4P09017 AC027228.2-201ENST00000567141 2154 ntBASIC4.56□□□□□ -1.68
HOXC4P09017 AC021146.4-201ENST00000309229 279 ntBASIC4.56□□□□□ -1.68
HOXC4P09017 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXC4P09017 MTATP6P19-201ENST00000413797 659 ntBASIC4.56□□□□□ -1.68
HOXC4P09017 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.56□□□□□ -1.68
HOXC4P09017 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXC4P09017 NDUFA5P1-201ENST00000433858 341 ntBASIC4.56□□□□□ -1.68
HOXC4P09017 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXC4P09017 ARAFP2-201ENST00000440565 559 ntBASIC4.56□□□□□ -1.68
HOXC4P09017 THAP12P8-201ENST00000447914 2115 ntBASIC4.56□□□□□ -1.68
HOXC4P09017 ISCUP1-201ENST00000454451 448 ntBASIC4.56□□□□□ -1.68
HOXC4P09017 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXC4P09017 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
HOXC4P09017 ARL4AP1-201ENST00000503220 705 ntBASIC4.56□□□□□ -1.68
HOXC4P09017 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXC4P09017 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC4P09017 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXC4P09017 AP001781.1-201ENST00000530977 207 ntBASIC4.56□□□□□ -1.68
HOXC4P09017 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXC4P09017 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.56□□□□□ -1.68
HOXC4P09017 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXC4P09017 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.56□□□□□ -1.68
HOXC4P09017 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXC4P09017 RPL12P25-202ENST00000598100 674 ntBASIC4.56□□□□□ -1.68
HOXC4P09017 AL133243.1-201ENST00000614487 366 ntBASIC4.56□□□□□ -1.68
HOXC4P09017 AC022106.2-201ENST00000620114 757 ntBASIC4.56□□□□□ -1.68
HOXC4P09017 AP005019.3-201ENST00000620418 560 ntBASIC4.56□□□□□ -1.68
HOXC4P09017 AC002044.3-201ENST00000623314 541 ntBASIC4.56□□□□□ -1.68
HOXC4P09017 AL592182.3-201ENST00000642132 3304 ntBASIC4.56□□□□□ -1.68
HOXC4P09017 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXC4P09017 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
HOXC4P09017 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC4P09017 AL136164.3-201ENST00000624429 3978 ntBASIC4.55□□□□□ -1.68
HOXC4P09017 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
HOXC4P09017 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HOXC4P09017 AP001273.1-201ENST00000624493 3152 ntBASIC4.55□□□□□ -1.68
HOXC4P09017 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC4P09017 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HOXC4P09017 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HOXC4P09017 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC4P09017 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
HOXC4P09017 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC4P09017 AL137100.1-201ENST00000556703 1620 ntBASIC4.55□□□□□ -1.68
HOXC4P09017 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC4P09017 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC4P09017 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC4P09017 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.55□□□□□ -1.68
HOXC4P09017 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXC4P09017 RPEP3-201ENST00000425462 676 ntBASIC4.55□□□□□ -1.68
HOXC4P09017 NIPA2P1-201ENST00000426223 976 ntBASIC4.55□□□□□ -1.68
HOXC4P09017 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXC4P09017 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC4P09017 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.55□□□□□ -1.68
HOXC4P09017 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.55□□□□□ -1.68
HOXC4P09017 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXC4P09017 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC4P09017 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXC4P09017 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC4P09017 RPL26P30-202ENST00000602923 645 ntBASIC4.55□□□□□ -1.68
HOXC4P09017 AC079791.1-201ENST00000605356 973 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms