Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
MT-ND1P03886 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
MT-ND1P03886 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.52□□□□□ -1.69
MT-ND1P03886 RNU6-709P-201ENST00000517257 104 ntBASIC4.52□□□□□ -1.69
MT-ND1P03886 IGKV3D-34-201ENST00000522638 302 ntBASIC4.52□□□□□ -1.69
MT-ND1P03886 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.52□□□□□ -1.69
MT-ND1P03886 NMNAT1P1-201ENST00000554095 876 ntBASIC4.52□□□□□ -1.69
MT-ND1P03886 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.52□□□□□ -1.69
MT-ND1P03886 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.52□□□□□ -1.69
MT-ND1P03886 RN7SL52P-201ENST00000584271 284 ntBASIC4.52□□□□□ -1.69
MT-ND1P03886 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.52□□□□□ -1.69
MT-ND1P03886 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.52□□□□□ -1.69
MT-ND1P03886 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.52□□□□□ -1.69
MT-ND1P03886 AC087783.2-201ENST00000605070 562 ntBASIC4.52□□□□□ -1.69
MT-ND1P03886 AC092574.1-201ENST00000609771 420 ntBASIC4.52□□□□□ -1.69
MT-ND1P03886 AC008115.4-201ENST00000619780 775 ntBASIC4.52□□□□□ -1.69
MT-ND1P03886 AL162233.1-201ENST00000620014 944 ntBASIC4.52□□□□□ -1.69
MT-ND1P03886 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
MT-ND1P03886 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
MT-ND1P03886 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
MT-ND1P03886 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.52□□□□□ -1.69
MT-ND1P03886 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
MT-ND1P03886 PHKBP1-201ENST00000450951 1951 ntBASIC4.52□□□□□ -1.69
MT-ND1P03886 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
MT-ND1P03886 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
MT-ND1P03886 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
MT-ND1P03886 AC007382.1-201ENST00000624376 2618 ntBASIC4.52□□□□□ -1.69
MT-ND1P03886 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
MT-ND1P03886 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
MT-ND1P03886 AC008758.3-201ENST00000507003 1829 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 DDX18P4-201ENST00000511690 1966 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
MT-ND1P03886 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.51□□□□□ -1.69
MT-ND1P03886 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
MT-ND1P03886 AL451142.2-201ENST00000429076 2090 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
MT-ND1P03886 IL6STP1-201ENST00000346911 1020 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 RNU6-304P-201ENST00000364855 107 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
MT-ND1P03886 RNU6-532P-201ENST00000384318 107 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 MIR195-201ENST00000385194 87 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 MIR320B1-201ENST00000390209 79 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 ARL4AP5-201ENST00000404372 599 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 SNORA11.5-201ENST00000408163 128 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.51□□□□□ -1.69
MT-ND1P03886 AL445528.1-201ENST00000426330 420 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
MT-ND1P03886 RPL34P20-201ENST00000442771 351 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 OR7E125P-201ENST00000443450 846 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.51□□□□□ -1.69
MT-ND1P03886 EIF4A1P11-201ENST00000451239 222 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 AL606490.1-201ENST00000452266 765 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.51□□□□□ -1.69
MT-ND1P03886 AC008410.1-201ENST00000483777 339 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 TCP11X3P-202ENST00000514289 1254 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 AC016550.3-201ENST00000515706 767 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 IGLVIV-64-201ENST00000518581 301 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.51□□□□□ -1.69
MT-ND1P03886 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
MT-ND1P03886 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.51□□□□□ -1.69
MT-ND1P03886 AL049839.1-201ENST00000556151 657 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.51□□□□□ -1.69
MT-ND1P03886 RPL21P136-201ENST00000605378 396 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 COX6CP4-201ENST00000605798 228 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
MT-ND1P03886 AC116447.1-201ENST00000613153 453 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.51□□□□□ -1.69
MT-ND1P03886 AC106730.3-201ENST00000624568 641 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 AP000720.1-201ENST00000625091 483 ntBASIC4.51□□□□□ -1.69
MT-ND1P03886 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.51□□□□□ -1.69
MT-ND1P03886 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
MT-ND1P03886 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.51□□□□□ -1.69
MT-ND1P03886 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
MT-ND1P03886 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.51□□□□□ -1.69
MT-ND1P03886 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.51□□□□□ -1.69
MT-ND1P03886 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
MT-ND1P03886 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
MT-ND1P03886 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
MT-ND1P03886 AC009229.4-201ENST00000623854 1947 ntBASIC4.5□□□□□ -1.69
MT-ND1P03886 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MT-ND1P03886 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
MT-ND1P03886 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.5□□□□□ -1.69
MT-ND1P03886 AC093535.2-201ENST00000624769 2326 ntBASIC4.5□□□□□ -1.69
MT-ND1P03886 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
MT-ND1P03886 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
MT-ND1P03886 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
MT-ND1P03886 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
MT-ND1P03886 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
MT-ND1P03886 MIR421-201ENST00000365696 85 ntBASIC4.5□□□□□ -1.69
MT-ND1P03886 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MT-ND1P03886 RNU6-883P-201ENST00000384597 107 ntBASIC4.5□□□□□ -1.69
MT-ND1P03886 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
MT-ND1P03886 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.5□□□□□ -1.69
MT-ND1P03886 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MT-ND1P03886 AL589655.1-201ENST00000405398 482 ntBASIC4.5□□□□□ -1.69
MT-ND1P03886 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.5□□□□□ -1.69
MT-ND1P03886 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.5□□□□□ -1.69
MT-ND1P03886 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 239.1 ms