Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC126120.1-201ENST00000431082 470 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS4BO75351 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS4BO75351 HMGB3P10-201ENST00000434734 572 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 AC073909.1-201ENST00000447112 999 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 ABCC13-202ENST00000463099 3842 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS4BO75351 AC069528.1-202ENST00000482888 637 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 RPS3AP22-201ENST00000488297 769 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS4BO75351 AC093890.1-201ENST00000502554 540 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 AC091860.1-201ENST00000505723 432 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 RNU6-1129P-201ENST00000515964 104 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS4BO75351 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS4BO75351 PMS2P3-207ENST00000529061 717 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS4BO75351 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS4BO75351 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS4BO75351 AL390726.5-202ENST00000564800 256 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS4BO75351 AP001269.3-201ENST00000588718 329 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS4BO75351 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS4BO75351 AC010620.1-201ENST00000601088 1102 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 TUSC7.1-201ENST00000610969 165 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 AL392048.1-201ENST00000613946 534 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 AC009318.3-201ENST00000616916 503 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 SAMMSON-227ENST00000642114 1199 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS4BO75351 MTND4P10-201ENST00000446199 1363 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS4BO75351 AP001029.2-203ENST00000589795 4910 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS4BO75351 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS4BO75351 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS4BO75351 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
VPS4BO75351 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS4BO75351 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS4BO75351 MRRFP1-201ENST00000435941 1675 ntBASIC5.5□□□□□ -1.53
VPS4BO75351 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS4BO75351 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4BO75351 C4BPAP1-201ENST00000415474 1893 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4BO75351 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VPS4BO75351 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4BO75351 AC120338.1-201ENST00000625074 1541 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4BO75351 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VPS4BO75351 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4BO75351 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4BO75351 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4BO75351 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS4BO75351 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4BO75351 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4BO75351 AC017079.1-201ENST00000333650 415 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 RNA5SP46-201ENST00000362370 120 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 RNU6-83P-201ENST00000384568 112 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 RNU6-1263P-201ENST00000384601 106 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VPS4BO75351 SFR1P1-201ENST00000403720 688 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 RN7SKP29-201ENST00000410957 272 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 AC079809.1-201ENST00000415468 276 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 AC090960.1-201ENST00000421072 306 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 RPF2P1-201ENST00000424137 906 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 RIMKLBP2-201ENST00000424737 654 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS4BO75351 MTND4P32-201ENST00000437189 1237 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 AL353093.1-201ENST00000441292 436 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS4BO75351 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS4BO75351 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS4BO75351 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.49□□□□□ -1.53
VPS4BO75351 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS4BO75351 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS4BO75351 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS4BO75351 AL645937.3-201ENST00000453647 936 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 ATG12P2-201ENST00000456830 416 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.49□□□□□ -1.53
VPS4BO75351 BET1P1-201ENST00000482276 359 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 AC091544.1-201ENST00000484702 348 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 RPSAP51-201ENST00000497462 645 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS4BO75351 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS4BO75351 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS4BO75351 SEPT10P1-201ENST00000517342 1162 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS4BO75351 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS4BO75351 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 AP000926.4-201ENST00000527351 454 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS4BO75351 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS4BO75351 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.49□□□□□ -1.53
VPS4BO75351 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS4BO75351 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS4BO75351 AC022662.1-201ENST00000580252 331 ntBASIC5.49□□□□□ -1.53
VPS4BO75351 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS4BO75351 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS4BO75351 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms